Gordonia sp. NB41Y: Q9K23_00810
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Entry
Q9K23_00810 CDS
T11308
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gon Gordonia sp. NB41Y
Brite
KEGG Orthology (KO) [BR:
gon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gon03051
]
Q9K23_00810 (pafA)
Enzymes [BR:
gon01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
Q9K23_00810 (pafA)
Proteasome [BR:
gon03051
]
Prokaryotic proteasome
Bacterial regulatory particles
Q9K23_00810 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WLP90874
LinkDB
All DBs
Position
complement(181825..183183)
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDGLIQLINHDRAGELVLEDLLVDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLATPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAEMTTMLKVGSATLVLEMIEAGVAF
RDFALDNPIRAIREVSHDPTGRRPVRLAGGRQATALEIQREYHARAVEHLVNRQPDPEMD
MVVDLWGRVLDAVEADDFSKVDTEIDWVIKRKLFQRYQDRYSMELSDPKIAQLDLAFHDI
KRGRGVFDLLTRKGLVRRATTDEAIATAVNEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgaatcatgggtatcgagaccgagttcggtgtcacgtgcaccttccacggt
caccgtcggctgagtccggacgaggtggcgcgctacctgttccggcgggtggtgtcgtgg
ggccggtcgtccaacgtcttcctccagaacggtgcccggctgtatctcgacgtcgggtcg
catccggagtacgcgaccgccgagtgcgacgggctgatccagctgatcaaccacgaccgc
gccggtgagctcgtgctggaggacctcctggtcgacgccgaacagcgcctggccgacgag
ggtatcggcggcgacatctacctgttcaagaacaacaccgactccgcgggcaactcgtac
ggctgccacgagaactatctcgtcgtgcgggccggcgagttctcccggatctccgatgtg
ctgctgccgttcctggtgacccggcagctgatctgcggggcgggcaaggtcctggccacg
ccgaaggccgcgaccttctgcctgtcacagcgtgccgagcacatctgggagggcgtgtcg
tcggccaccacgcggtcacggccgatcatcaacacgcgcgacgagccgcacgccgacgcc
gagaagtaccgccgcctgcacgtgatcgtcggcgactcgaacatggcggagatgaccacc
atgctcaaggtcggctcggcgacactcgtgctggagatgatcgaggccggtgtcgcattc
cgggatttcgccctcgacaatccgatccgcgcgatccgcgaggtcagccacgatcccacc
gggcgtcgtccggtgcggctggccgggggtcggcaggcgaccgcattggagatccagcgc
gaataccacgcgcgcgccgtcgagcatctggtcaaccggcagccggatccggagatggac
atggtggtcgacctgtggggccgggtgctcgacgcggtcgaggccgacgacttctccaag
gtcgacaccgagatcgactgggtgatcaagcgcaaactgttccagcgctaccaggaccgg
tactcgatggagctgtcggatccgaagatcgcgcagctcgacctcgccttccacgacatc
aagcgcggacgcggcgtgttcgacctgctcacccgcaagggactggtccggcgggccacc
accgacgaggcgatcgccaccgcggtcaacgagccgccccagaccacccgggcgaagctg
cgtggcgacttcatctcggccgcgcagaaggccgggcgtgacttcaccgtcgactgggtg
catctgaagctcaacgatcaggcgcaacgcaccgtcctgtgcaaggacccgttccgtagt
gtggacgagcgcgtcgatcgcctgatcgcctccatgtga
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