Gordonia sp. SMJS1: QAD21_11540
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Entry
QAD21_11540 CDS
T10225
Name
(GenBank) lycopene cyclase family protein
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos00906
Carotenoid biosynthesis
gos01100
Metabolic pathways
gos01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
QAD21_11540
Enzymes [BR:
gos01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
QAD21_11540
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
TrkA_N
FAD_binding_3
XdhC_C
3HCDH_N
ApbA
NAD_binding_8
DAO
NAD_binding_7
2-Hacid_dh_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
WGJ87644
LinkDB
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Position
complement(2525231..2526358)
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AA seq
375 aa
AA seq
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MSSGVIVAGAGPAGRALVHRLARAGVPVTLVDPSPDRVWRSTFACWSDELPEWVEQSAVA
ARTARIGIAGRELEEVARGYTVFDTPGLQRSLTLDGVPTRSARVVEIDGARVHLDDGSVL
TGDAVVDCRGALPHDAPRQTAYGIVVDAEVAAPVLDGHEALLMDWRGGATDRRALPSFLY
VVPLGGGEYLLEETCLAGHPALGLDELERRLAARLGGMPSGIRRVEHVDFPLTGSSLHPW
RDPVFRFGAAGGFKNPTTGYSVATSLMCTDAVVAALAAGRDPAADLWPPSTRAVHNLRLR
GLSALLGLSPSQTVAFFEAFFTMPLAAQRSYLSKRDDLTGTMSAMTRVIAAVDMRTRVVV
ARGAMSTPAWAGDAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccggagtcatcgtcgcgggggccgggccggccggccgcgccctcgtccaccgc
ctggcccgtgccggcgtaccggtcaccctggtcgatccgtcccccgaccgggtctggcgg
tccacgttcgcatgctggtccgacgagttgcccgagtgggtcgagcagtccgccgtcgcc
gcccggaccgcgcgcatcgggatcgcgggccgcgaactcgaggaggtggcccgcgggtac
accgtcttcgacacccccggcctgcaacggtcactgaccctcgacggggttccgacccgt
tccgctcgggtggtcgagatcgacggcgcgcgtgtgcatctcgatgacggttcggtcctg
accggcgatgccgtggtcgactgtcgcggtgcgctcccccacgacgcacctcgacagacc
gcgtacgggatcgtcgtcgacgctgaggttgccgcacccgtgctggacgggcacgaggca
ctgctcatggactggcggggtggcgcgacagaccgccgggcgctgccgtcctttctgtat
gtcgtgccgctcggcgggggcgagtacctcctcgaggagacctgtctcgccgggcatccc
gccctcggtctcgacgaactcgaacgccgcctggccgcgcggctcggcgggatgccgtcg
gggatccggcgggtcgagcacgtcgacttcccgctgaccggctcgtcattacacccctgg
cgcgatcccgttttccggttcggcgccgcgggcggtttcaagaacccgacgaccggctac
agcgtcgcgacatcgttgatgtgcaccgacgccgtggtggccgctctcgccgcgggtcga
gaccccgccgcggatctgtggccgccgtccacccgtgcggtacacaacctgcgtctccgt
gggctcagcgccctactggggctcagtccgtcgcagacggtcgcgttcttcgaggcgttc
ttcacgatgccccttgccgcacaacgcagttacctgagcaagcgggacgatctcaccggc
acgatgagcgcgatgaccagggtcatcgccgcagtcgacatgcgtactcgcgtcgtggtg
gcgcgcggtgcgatgtccaccccggcgtgggccggcgacgccggctga
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