Gordonia sp. SMJS1: QAD21_16100
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Entry
QAD21_16100 CDS
T10225
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QAD21_16100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_16100
Enzymes [BR:
gos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QAD21_16100
DNA repair and recombination proteins [BR:
gos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QAD21_16100
Prokaryotic type
QAD21_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
WGJ84303
LinkDB
All DBs
Position
complement(3525804..3526487)
Genome browser
AA seq
227 aa
AA seq
DB search
MTAPPKPLAELIDPGWAQALAPVEPLITEMGRFLRTEIAEGRRYLPAGQHVLRAFTRPLD
DVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPRSLTNIYTEYCADLGYPMPTTGDLTPW
ADNGVLLLNRVLTVAPGEPASHRGKGWEEVTECAIKALAARDEPLVAILWGRDAAGLEKW
LPDVPTIVSAHPSPLSASRGFFGSRPFSRANEELMDLGAEPVEWRLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaccacccaaaccccttgccgaactgatcgacccgggctgggcgcaggcgctc
gccccggtcgagccgctcatcaccgagatgggccggttcctgcgcaccgagatcgccgag
gggcggcgctatctgcctgcgggacaacatgtcctgcgggccttcacgcgccccctcgac
gacgtgcgcgtgctgatcgtcgggcaggatccatatccgacgccgggacacgccgtcgga
ctgagcttctcggtggcgcccgacgtgcgcccgatcccgcgttccctgacgaacatctac
accgaatactgcgccgatctcggctaccccatgccgaccaccggggatctcacgccctgg
gcggacaacggtgtgcttctgttgaaccgcgtgctcacggtggcccccggcgagccggcc
tctcaccgggggaagggctgggaagaggtgaccgagtgcgcgatcaaggcgcttgccgcc
cgcgacgagccgctcgtcgcgatcctgtggggccgggacgccgcgggactggagaagtgg
ctgcccgacgtcccgaccatcgtgtcggcgcatccatcaccgttgtcggcctcgcgcggg
ttcttcgggtcccgacccttcagccgggccaacgaggaactgatggacctcggggccgaa
ccggtggagtggcgtctgccgtga
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