Gemella sp. oral taxon 928: AXE85_00180
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Entry
AXE85_00180 CDS
T04256
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
got
Gemella sp. oral taxon 928
Pathway
got03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
got00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXE85_00180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
got03400
]
AXE85_00180
Enzymes [BR:
got01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AXE85_00180
DNA repair and recombination proteins [BR:
got03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXE85_00180
Prokaryotic type
AXE85_00180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AME08718
LinkDB
All DBs
Position
complement(51124..51780)
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AA seq
218 aa
AA seq
DB search
MDKSWKEIFKNYQYRKELGETVDNINIVRNRATIFPPKEQVFRVFELPIEDIKVVILGQD
PYHNEKQACGLSFSVNDGVALPKSLINIYKELYDDLGIKPAKTGNLEPWFKQGVFLLNAV
LTVEKNKPASHNNIGWQNFTDYIIKTISDKNNNVVFILWGAYARSKKMLIDTTKHKIIES
AHPSPLSAYRGFFGSKPFSRTNQFLRECGKTEINFDLN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatcatggaaagaaatatttaagaattatcaatatagaaaagaattaggcgaa
acggtagataatataaatatagtaaggaacagggcaactatttttcctccgaaggagcaa
gtctttagagtttttgaactacctattgaagatattaaagttgttatattagggcaagac
ccttatcataatgaaaaacaagcttgcggtttaagtttttccgttaatgacggagtggca
ttacctaaaagccttattaatatttataaggagttatatgatgatttaggtattaaaccg
gcgaaaaccggaaatttggaaccatggtttaaacaaggagtatttcttttaaatgcggtg
cttactgtagaaaaaaacaaacctgccagccataataatatagggtggcaaaattttacg
gactatattattaagacgatttctgataagaataataatgttgtttttatactttggggg
gcatatgcacgcagtaagaagatgttaattgatacaacaaagcataaaattatagaatct
gctcatccaagtccgttgtcagcgtatcgtggtttttttggaagtaaacctttttcaaga
acgaatcagtttttaagagaatgtggaaaaacggaaattaactttgatttgaattaa
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