Gluconobacter oxydans 621H: GOX1359
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Entry
GOX1359 CDS
T00230
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
gox
Gluconobacter oxydans 621H
Pathway
gox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOX1359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gox03400
]
GOX1359
DNA repair and recombination proteins [BR:
gox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOX1359
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GOX1359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_16
AAA_21
DnaJ_CXXCXGXG
AAA_29
DUF4350
Anti-TRAP
AAA_25
RsgA_GTPase
nSTAND3
DUF5351
DUF2162
Motif
Other DBs
NCBI-ProteinID:
AAW61111
UniProt:
Q5FR85
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Position
complement(1489716..1492241)
Genome browser
AA seq
841 aa
AA seq
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MSQTPSPHEMIRVRGAREHNLENVDVDLPRDKLVVVTGVSGSGKSSLAFGTIYAEAQRRY
LESVSPYARRLFDQMPVPVVASIDGLPPAVALQQQRGGSSSRSSVGSLTTLSNLLRMLYS
RAGTYPPGLSRLEAESFSPNTPMGACPKCHGLGRIYDVTEKTLVPDDSLSIRDRAVAAWP
TAWQGQNFRDILITRGVDVDCPWRDLPKKTRDWILFTEETPTEPVYPGRTHAQVVEAIKR
GIPADYNGTFSGARRYVLHTFTQSQSEKMRKRAASFMVSAPCPVCHGQRLNPDALRVTFD
GLNIADFSNRTLEDIAASLRTSAKTLANGKNATTVAARGMVDAMIERIDVLLDLGLGYLQ
LDRGVQTLSPGEYQRLRLGTQIRSNLFGVVYVLDEPSSGLHPADTQALLRALDGLRDAGN
SLIVVEHNPDVIRRAEWLVDVGPDAGERGGRILYSGLPDGLQNVKESRTRPYLFGTVQPR
TTPVRKPTGTLELTDICWNNLDHLALTLPLGVLVSVTGVSGSGKSSLVGQALVSIMARTL
GQKVDIDPDDDSTDDAPPPEHREPKGNVSGGTGPIKRMVMIDQKPIGRTPRSNPATYTGL
FDTIRRLFAETPDAKKRRFDAGWFSFNVAKGRCPRCEGVGTVDVELLFLPTVQTPCPVCH
GSRYKPEVLEVLWNGHSIADVLGLSIDDACDVFADVPALARGFDTLRRGGLGYLRLGQPA
TELSGGEAQRIKLATELQKQRNGHILYVLDEPTTGLHPADVDRLMLQLQALVDQGNTVVL
AEHDMRVAADSDWIIDLGPGAGRKGGRIVASGTPETVAASEHSVTAPFLRRYVHPEPQDA
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagacgccctcgccccatgagatgatccgcgtcagaggggcgcgggaacacaat
ctggaaaacgtggatgtggacctgccgcgcgacaagctcgtcgtcgtcacaggcgtatcc
gggtccggcaaatcctccctcgccttcgggacgatctatgccgaggcccagcggcgctat
ctggagtccgtctccccctatgccaggcgcctgttcgatcagatgccggtgccggtcgtg
gcctccatcgacggactaccgcccgccgtcgcgcttcagcagcagcgcggcggaagcagc
agccgctccagcgttggcagcctgacgacgctctcgaacctgctgcggatgctctattcc
cgcgcaggcacctatccgcccggcctgtcacgactggaagcggaatccttttcccccaac
acccccatgggcgcctgtccgaaatgccacgggctggggcgtatctatgacgtcacggaa
aaaacgctcgttcccgatgacagcctgagcatccgcgaccgtgccgtcgcagcctggcct
acggcatggcaggggcagaacttccgggacattctcatcacccggggcgtggatgtggac
tgcccctggcgcgacctgccaaaaaagacgcgggactggatcctcttcaccgaggaaacc
ccgaccgaacccgtctatccgggacggacccacgctcaggtcgtggaggccatcaagcgc
ggtatcccggccgattacaacggcacgttcagtggcgcacgccgctacgtcctgcacacc
ttcacgcagtcgcaaagcgagaaaatgcgcaagcgcgcagcctcgttcatggtctccgcc
ccctgccccgtgtgtcatggacagcgcctgaaccccgatgccctgcgcgtgacattcgac
ggactgaacatcgccgatttttcgaaccgcacgctcgaagacatcgcagcctcactccgc
acatccgcaaaaacccttgcaaatggaaaaaacgccacgaccgtagcggcgcgcggcatg
gtggacgccatgatcgagcgaatcgacgtgctgctggatttgggactgggctatctccag
cttgaccgcggtgtgcagacgctctctccaggcgaataccagcgtctgcggctcggcacg
cagatccgctcgaacctgtttggcgtggtctatgtgctggatgaacccagctccggcctg
catcccgccgatacgcaggcccttctgcgggcactggacggactgcgcgatgcgggcaat
tcgctgatcgtggtcgagcataaccctgacgtgatccgccgcgcggaatggctggtggat
gtcggcccggatgccggcgaacggggcggtcgcattctctatagcggcctgccagacgga
ctgcagaacgtgaaagagtcccgcacccgcccctacctgttcggtacggtccagcctcgc
accacacctgtccgcaagccaaccggcacgctggaactgaccgacatctgctggaacaat
ctggaccatctggccctgacactcccgctcggggtgctggtctcggtgacgggcgtttca
gggtccggaaaatccagtctcgtcgggcaggccctcgtctccatcatggcccgcactctc
ggccagaaagtggacatcgaccccgacgacgacagcacggatgatgccccgccccccgaa
caccgcgagcccaaagggaacgtttcgggcggaaccggcccgatcaaacgcatggtcatg
atcgaccagaagccgatcggacgcaccccgcgttccaatcccgccacctatactggcctg
ttcgacacgatccgccgcctgtttgccgaaacgccggacgcgaagaaacgccgtttcgat
gccggctggttttccttcaacgtcgccaagggacggtgcccgcgctgtgagggcgtgggg
acagtcgatgtggagcttctgttcctgccaaccgtgcagacaccctgccccgtctgccac
ggcagccgctacaaacccgaagtgctggaagttctttggaacgggcacagcatcgcggac
gtactgggcctgagcattgacgatgcctgcgacgtctttgcggatgtgccggctctggcg
cgtggcttcgataccctgcgccgcgggggactgggctatctccgtctcggacagcccgcc
accgaactgtcaggcggcgaagcacagcgcatcaagctcgcaaccgagcttcagaaacag
cgcaacgggcacattttgtatgttctggatgagcccacaaccggcctacatcctgccgat
gtggaccggctgatgctccagcttcaggcgctggtcgatcagggcaatacggtcgttctg
gccgagcacgacatgcgagtggcagcggacagtgactggatcatcgatctcggccccggt
gcaggacgcaagggcggccggatcgtggcatcaggaacaccggagaccgtcgcggcttcg
gaacacagcgtcaccgccccgttcctccgccgctacgttcaccccgaacctcaggacgca
ggatga
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