Gluconobacter oxydans 621H: GOX1515
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Entry
GOX1515 CDS
T00230
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gox
Gluconobacter oxydans 621H
Pathway
gox03410
Base excision repair
gox03430
Mismatch repair
gox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GOX1515
03430 Mismatch repair
GOX1515
03440 Homologous recombination
GOX1515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gox03400
]
GOX1515
DNA repair and recombination proteins [BR:
gox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GOX1515
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GOX1515
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GOX1515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AAW61257
UniProt:
Q5FQT9
LinkDB
All DBs
Position
complement(1667482..1669281)
Genome browser
AA seq
599 aa
AA seq
DB search
MLADDTGAVLGVTRSAGHRRWIWRDPRLAEADNRLALALAQQAGIPELLARILSARGVAP
PDASSFLNPRLRDAMPDPSCLQDMDRAAERLAQAVRNREHVGLFGDYDVDGACGTALVCD
TLRELGCTVSTHIPDRLTEGYGPNTAALENLLSQGATLLVCIDCGTAAIDILNGLTDRAD
IIVLDHHKPDGAALPKGIVVNPNRLDCTSGLGSICATAVAFLTMVATIRHLRRCNWFDED
QVIPDLLKRLDLTALATICDVMPLTGLNRALVMQGLRVMSRGERLGLATLSSVAGVKEEA
SAMACGFALGPRINAGGRIAQADLGLKLLLSDDVVEARALAEQLDRVNRQRQTVESTILD
SAMEQAQQQLDAGHAVIFLHGETWHPGVVGIVAGRLKERYNRPALVAALTDGVIKGSARS
VPGLDLGTAIIAARQNGLLLSGGGHAMAAGFSLSADRADEFHSWLDSQLSGALTLPKQDA
LKLDGIMTLAGASVAVADQLARLEPFGPGNEEPVLAISNVRCVKSERIGKDGNTLRVILQ
GEDGGTRLRGLVFRAADKPFAALLEDRSMPLVHVAGTLRAETWQERKNLSFFISDAAPA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagacgatacgggtgccgtcctcggcgtaacccgaagtgcaggacaccgccgc
tggatctggcgcgatccccgcctggcggaagcagacaaccgcttggcactcgccctggcc
cagcaggccggtattcccgaacttctggcccgtatcctctcggcacgcggcgtcgcccca
cccgacgcctcctcctttctcaatccccgtctgcgcgacgccatgcctgacccgtcctgt
ctgcaggacatggaccgggccgccgaacgcctcgcccaggctgtgcgcaaccgcgagcat
gttggcctgttcggcgactacgacgtggacggcgcctgcggaactgccctcgtctgcgac
acactgcgcgaactgggctgcaccgtcagcacccacattcccgaccgcctgaccgaaggc
tacggccccaataccgcagcccttgaaaacctgctttcccaaggcgccacccttctggtc
tgcatcgactgcggcacggcagcgatcgatatcctcaacggcctaaccgaccgcgccgat
atcatcgtgctcgatcaccacaaacccgacggcgcggccctgccgaaaggcatcgtagtc
aatccgaaccgtctggactgcacctccggtctgggcagcatctgcgccaccgccgtcgcc
ttcctcaccatggtcgccacgatccgccacctgcgccgctgtaactggttcgatgaagat
caggtcattcccgacctgctcaaacgcctcgacctcacggcgctggcgaccatctgcgac
gtcatgcccctgaccggcctaaaccgcgccttggtcatgcaaggtctgcgcgtcatgtcc
cgcggcgagcgcctcgggctggccacgctctcctccgttgcaggcgtaaaggaagaagcc
agcgccatggcctgcggcttcgccctcggcccccgcatcaatgccggtggccgcatcgca
caggccgatctgggtctgaaactcctactgtcggatgatgtcgtggaagcccgcgccctc
gccgaacagctcgaccgcgtcaaccgccagcgccagaccgtcgaatccacaatcctcgat
tccgccatggaacaggcacagcagcagctcgatgcgggccacgccgtcatcttcctgcac
ggtgaaacatggcaccccggcgtcgtcggcatcgtcgcaggccgcctgaaagagcgctac
aaccgccctgccctcgtcgccgccctgacggatggcgtcatcaaaggctcggcccgctcc
gttccgggactggacctcgggaccgccatcatcgcagcccgccagaacggcctgctgctc
agcggcggcgggcacgccatggctgccggcttctcgctttcggccgatcgtgccgacgag
ttccacagctggctcgacagtcagctttccggcgccctcaccctccccaaacaggacgcc
ctgaagctcgacggcatcatgactctggccggcgcctcagtcgcggtggcggaccagctc
gcccggctggaacctttcggccccggcaacgaggaaccggtcctcgccatcagcaatgtc
cgctgcgtcaaaagcgagcgtatcggcaaggatggcaacaccctgcgcgtcatcctgcaa
ggcgaggacggaggcacacgcctgcgtggcctggtcttccgtgcagccgacaaacccttc
gccgccctgctggaagaccgctccatgccactggtccatgtcgcaggcacattacgggcc
gagacatggcaggagagaaaaaatctgtcttttttcatttctgacgctgcccccgcttga
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