Gordonia pseudamarae: GII33_11065
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Entry
GII33_11065 CDS
T07482
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gpd03051
]
GII33_11065 (pafA)
Enzymes [BR:
gpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
GII33_11065 (pafA)
Proteasome [BR:
gpd03051
]
Prokaryotic proteasome
Bacterial regulatory particles
GII33_11065 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QHN26424
LinkDB
All DBs
Position
complement(2505338..2506696)
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AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLQNGARLYLDVGS
HPEYATAECDSLIQLVNHDRAGELVLEDLLIDAEQRLADEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLHTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEMTTLLKVGSATLVLEMIESGVSF
RDFALDNPIRAIREVSHDTTGRRQVRLAGGRQASALEIQREYYARAVEHMTNRKPDPEMD
LVVDLWGRVLDAVESDDFSKVDTEIDWVIKRKLFERYQNRYSMDLSDPKIAQLDLAYHDI
KRGRGVFDVLTRKGLVARATTDEAIKEAVDEPPQTTRAKLRGDFISAAQKAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgaatcatggggatcgagacagagttcggtgtcacgtgcacctttcacggg
catcgtcgactgagtcctgacgaggttgcccgatacctgttccggcgggtggtctcgtgg
ggccggtcgtcgaatgtgttcttgcagaacggtgcccggctctatctcgatgtgggttcg
catccggagtacgcgacggccgagtgcgacagcctgatccagttggtcaatcatgatcgg
gccggcgagttggtgctcgaggatctgctgatcgacgccgagcagcggttggcggacgag
ggcatcggcggcgatatctatctgttcaagaacaacaccgattccgcgggcaattcgtac
ggttgccacgagaattatctggtggtccgggcgggggagttttcccggatctcggatgtg
ttgttgccgttcctggtgacccggcagttgatctgcggtgcgggcaaggtgttgcacacg
ccgaaggcggcgacgttctgtctgtcgcagcgggccgaacacatctgggagggtgtgtca
tcggcgacgacacggtcgcgtccgatcatcaacacccgtgatgagccgcatgccgacgcc
gagaagtaccggcggctgcacgtgatcgtcggcgattcgaacatgtcggagatgacgaca
ctgctgaaggtggggtctgcgacgctggttctggagatgatcgagtcgggggtgagtttc
cgcgatttcgcgctggacaatccgattcgcgcgatccgcgaggtcagtcacgacacgacg
ggccgtcgccaggtacggctggccggtggccggcaggcgagcgctttggaaatccagcgc
gaatattacgcacgcgcagtcgagcatatgaccaaccggaagcctgatccggagatggat
ctggtggtcgatttgtggggtcgtgttctcgatgccgtggaatccgatgatttctccaag
gtcgataccgagatcgattgggtgatcaagcgcaagctgttcgagcgctaccagaatcgc
tattcgatggatctgtcggatccgaagatcgcgcagctcgaccttgcctatcacgacatc
aaacggggccggggtgtgttcgatgtgctgacccgtaagggtttggtggcccgggcgacg
accgatgaggcgatcaaggaggcggtcgatgagccgccacagacgacgcgcgcgaagttg
cggggtgatttcatttcggcggcgcagaaggcgggccgggatttcacggtcgactgggtg
catctgaagctgaacgatcaggcgcagcggacggtgttgtgcaaagatccgttccgcagt
gtggatgagcgggtcgatcgtttgatcgcatcgatgtga
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