Gemmatimonas phototrophica: GEMMAAP_04290
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Entry
GEMMAAP_04290 CDS
T04580
Name
(GenBank) DNA polymerase II
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEMMAAP_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gph03032
]
GEMMAAP_04290
Enzymes [BR:
gph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEMMAAP_04290
DNA replication proteins [BR:
gph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
GEMMAAP_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
RNase_H_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
AMW06548
UniProt:
A0A143BNF2
LinkDB
All DBs
Position
1050047..1052458
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AA seq
803 aa
AA seq
DB search
MTIPRDEWLWGWDTTPGIVSVWAEESGQATVWRRPDGGALLTERAKFRPWVLLSSVDDLR
AAGVRYQHDDGDANAPGIRVRELAGPGALRVAVSAERWNVLETAICRGASKRLGQRITRV
QQLPRHERHVLPPEEQYLVATGRTYFRNLAFAQLQRLQFDLETTGLDPRVHRIFLIAVGT
PHGDVELLEARGQDDHAEADLLRRFVTRVQQLDPDVIENHNLHGFDLPFVRQRAKQLRVP
LPLGRLHHTALVERAAMRGVSSDRDGADERRVRLIVPGRECIDTLDAVRRYDFAARELPG
YGLKAVARHFGLSGPARELIPGDRIHAVYASDPDRVRRYAAADVTEVAGLARILGGAAFA
LARMAPRRYERLADAGAATGVIDPLLVRAYLRAGHALPAHADGDGTVHSGAALYLFTAGV
VQRVVKVDVASLYPSLMRAFRIGPVRDPLQALLFLVDQLVEQRLHAKQRAKEAAAGSDER
FTQEAMSAAMKLVVNSAYGYLAAGDGLTRFADVHAANEVTRRGRETLLLMCRALAERGAQ
LIEADTDGVYFGVPDHWSEHDERAMVDTVAALLPPLVRLEFEGRYAAMLSHEAKNYALLT
FDGRLQLKGVAFRSSRAEPYGEAFLRTAIARLLAGDVIGVRAAYLDTLTALHGRAVPTVD
VASRVRLRKSPEAYARSRQQRREFAYEALWQSGRQQWAPGDRVRVYRGANGTGRVIDEVE
DEARLDHDARDYDVAYYAALLRRTFAARLARAFHAHDFDLLFADAEQLPLFAPALETIRP
VATREDDVWQLLEPEPLSTTGQT
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ctgaccattccgcgagacgaatggctgtgggggtgggacaccacccccggcatcgtctcg
gtgtgggccgaggagtccggacaggcgaccgtctggcgacggcccgacggtggagccctc
ctgacggagagggccaaattccgcccctgggtcctgctgtcgtcggttgacgatctgcgg
gcggctggtgtgcgctaccagcatgatgacggtgacgcgaacgcgcccggcattcgcgtg
cgagagctcgcggggccgggcgcgttgcgtgtggccgtgtcggcagagcgctggaatgtg
ttggaaacggccatctgtcgcggggcctccaagcgcctcgggcaacgcattacccgtgtg
cagcaactgccacgacacgagcgacacgtcctgccgccggaggagcaatacctcgtggca
accggtcggacctactttcgcaatcttgcgttcgcgcaactgcaacggctgcagttcgat
ctcgagaccaccgggcttgacccgcgtgttcatcgcatttttctcatcgccgttgggaca
ccgcacggcgatgtggagctgctggaagcgcgcggccaggacgatcacgcggaagccgac
ctgctcaggcgtttcgtgacgcgggtgcagcagcttgatcccgatgtcattgagaatcac
aatctgcacgggttcgatctgccgtttgtgcggcagcgtgccaaacagctgcgcgtaccg
ttgccgcttgggcggctgcaccatacggcgctggtggagcgcgccgccatgcgtggcgtg
tcgagtgatcgcgatggggctgatgagcgacgggtacggctcattgtccctgggcgcgaa
tgcatcgatacgctcgacgccgtccggcgttacgactttgcggcgcgtgaattgcccggc
tacggactcaaggcggtggcacgtcacttcgggctctccgggccagcgcgcgaactgatc
cctggcgatcggattcacgccgtgtacgccagcgatccggatcgcgtacggcgctacgcc
gccgcggacgttaccgaagttgccggactggccaggattctggggggcgccgcctttgcg
ctcgcgcgcatggcgccccggcgctacgagcggctcgccgatgccggagcagccacggga
gtcattgatccgttgctcgtgcgtgcctatctgcgggcggggcacgcgctgcccgcgcac
gctgatggcgacggcacggtacacagcggggccgcgctctatctgttcacagccggtgtg
gtacagcgggtggtgaaggtggacgtggccagtctgtatccgtcgctcatgcgcgcgttt
cggattggcccggtacgtgatccgctgcaggcgttgctgttcctggtggaccagctggtg
gagcagcggttgcacgccaagcagcgggccaaagaggcggcggccggatcggacgaacgt
ttcacgcaggaggccatgagcgcggccatgaagctcgtggtcaactcggcgtacgggtat
ctggccgccggcgacgggctcacgcgctttgccgacgtgcacgccgccaacgaggtgacg
cgtcgtggccgggagacgctgttactcatgtgtcgtgcactggccgagcgtggcgctcag
ctcattgaagccgataccgatggggtgtacttcggcgtccccgaccactggagtgagcac
gacgagcgcgcgatggtggatactgtggcggccctgctgccaccgctcgttcggctggag
tttgaggggcgttacgccgccatgctgtcgcacgaagccaagaactatgcgttgctgacc
ttcgatggccgcctgcagctgaaaggcgtggcctttcggtccagccgcgcagagccgtac
ggtgaggccttcctgcgtaccgccattgcccgactgctggccggcgatgtcattggggtg
cgcgcggcctatctcgacacgctgacggcgctgcatggccgtgccgtgcccacggtagac
gtggcatcgcgcgtgcgcctgcggaaatcccccgaggcctacgcgcgatcacgccagcag
cgccgggagttcgcttatgaagccctgtggcagagcgggcgccagcagtgggcgccgggc
gatcgtgtacgcgtctaccgcggcgccaacggcaccgggcgcgtgatcgatgaagtggaa
gacgaggcacggctcgatcacgatgcgcgcgactacgatgtggcgtactacgcggcgttg
ctgcgccggacctttgccgcgcgattggcgcgcgcgttccatgcccacgacttcgacctg
ctctttgccgacgccgagcagcttccgctctttgcgccggcactggagaccatccggcca
gtggccacccgcgaggatgacgtgtggcagctgttggaaccggaaccgctcagtacaaca
ggccagacgtag
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