Gemmatimonas phototrophica: GEMMAAP_07320
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Entry
GEMMAAP_07320 CDS
T04580
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00260
Glycine, serine and threonine metabolism
gph00460
Cyanoamino acid metabolism
gph00630
Glyoxylate and dicarboxylate metabolism
gph00670
One carbon pool by folate
gph00680
Methane metabolism
gph01100
Metabolic pathways
gph01110
Biosynthesis of secondary metabolites
gph01120
Microbial metabolism in diverse environments
gph01200
Carbon metabolism
gph01230
Biosynthesis of amino acids
gph01240
Biosynthesis of cofactors
gph04981
Folate transport and metabolism
Module
gph_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GEMMAAP_07320
09102 Energy metabolism
00680 Methane metabolism
GEMMAAP_07320
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GEMMAAP_07320
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GEMMAAP_07320
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GEMMAAP_07320
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GEMMAAP_07320
Enzymes [BR:
gph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GEMMAAP_07320
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMW06647
UniProt:
A0A143BNI5
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All DBs
Position
1787194..1788429
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AA seq
411 aa
AA seq
DB search
MAVDPDIAHLIVEETQRQSDGLELIASENFVSPAVMEAVGSTLTNKYAEGLPGKRYYGGC
EVVDKVEQLAIDRAKQLFRADHANVQPHSGASANAAVFLAFMKPGETFLGMDLSQGGHLT
HGSPVNFSGLLYNAVSYGVTGDGLIDYDHMRAQAREHKPKIIIAGYSAYSRVIDWQAFAD
IAREVGALFWVDMAHFAGLAATGMYPSPVPFADVVTSTTHKTLRGPRGGIILCKAEHAKA
IDKAMFPGMQGGPLEHVIAGKAVAFHEALQPSFTAYCRQVVQNAQVLAQALVDRGYHIVS
GGTDNHLMLVDLRNKGLTGKVAEKVLDQAGITVNKNTVPNETQSPFITSGIRIGTPAVTT
RGMDADAMQQIAALIDRVLSAPDDAASVEAVKADVKALADRFPLYRAVSRV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccgtagatccggacattgctcacctcattgttgaggaaacgcagcggcagagcgat
ggtctggaactgattgccagcgaaaacttcgtgtcaccggccgtcatggaagccgtgggc
tcaacgctcaccaacaagtacgccgaagggttgccgggcaagcgctactacggtgggtgc
gaagtggtggacaaggtggagcagttggccatcgatcgcgccaagcagctctttcgtgcc
gatcatgccaacgtgcagccgcacagcggggcctcggccaacgcggcggtgttcctcgcg
ttcatgaagccgggcgagacgttcctcgggatggacctgtcgcagggcgggcacctcacg
cacggctcgccggtgaatttttccgggctgttgtacaacgcggtgtcgtacggtgtcacg
ggcgacgggcttattgactacgaccatatgcgcgcgcaggcacgtgagcataagcccaag
atcatcattgccggatacagcgcgtattcgcgagtgatcgactggcaggcgtttgccgat
atcgccagggaagtgggcgcgctgttctgggtggacatggcgcactttgccggtctggcg
gccacggggatgtatccgtcgcccgtgccctttgccgatgtggtcaccagcaccacgcac
aagacgctgcgcggcccgcgtggtggcatcattctgtgcaaggcggagcatgccaaggcc
attgataaggccatgttccccggcatgcagggtggtccgctggaacatgtcattgcgggc
aaggcggtggcgttccacgaggcattgcagccgtcgttcacggcgtattgccggcaggtg
gtgcagaacgcgcaggtgctcgcgcaggcgctggtcgatcgcggttatcacatcgtgagt
ggcggtaccgacaatcacctcatgctggtggatctgcgcaacaagggactcaccggcaag
gtggcggaaaaggtgctcgaccaggcgggcattacggtgaacaagaacaccgtgcccaac
gaaacgcagtcgccgtttatcacgagcggtattcgcattggcacgccggccgtcaccacg
cgcggcatggatgccgacgccatgcaacagattgcggcgcttattgatcgggtgctcagc
gcacccgacgatgcggcatcggtggaggctgtcaaggccgatgtcaaggcgctcgccgat
cgatttccgttataccgggcggtctcgcgcgtctga
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