Geomonas paludis: M1B72_01355
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Entry
M1B72_01355 CDS
T08160
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gpl
Geomonas paludis
Pathway
gpl01501
beta-Lactam resistance
gpl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_01355
01503 Cationic antimicrobial peptide (CAMP) resistance
M1B72_01355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_01355
01504 Antimicrobial resistance genes [BR:
gpl01504
]
M1B72_01355
Transporters [BR:
gpl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M1B72_01355
Antimicrobial resistance genes [BR:
gpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M1B72_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UPU36380
UniProt:
A0ABY4LEG4
LinkDB
All DBs
Position
306095..309307
Genome browser
AA seq
1070 aa
AA seq
DB search
MNNLGFAGRIARAFIDSKLTPLIVAASLLIGLYSVIATPREEEPQIVVPMVDIYLPMPGS
SPKEVEERVVTTFEKKIWEINGVEYIYSASRQGMGIITVRFLVGESMEDSLVKLYNKVMS
NRNLLPPGAGEPLVVSKSIDDVPILSLTLWSDRYDHNALRRVARELCDDLQKVENVAHSE
IKGGLSRELKVQLDPARLASYGLTPLTVMGALEKGNVSQRAGTFASGNREYSLEAGGFIA
DPADAGRLVVSVKEGRPVYLSDVATVTDGVQEPKDYVFFGLGPAAAHKSLKGGAADYPAV
TIAIAKRKGANATWVAEDLLKRVEFQKGKLIPSEMQVTVTRNYGETAKDKNDELLFHMFL
AAISVTILIAVFMGWRAGAVAAIAIPVTLALTMFIFNRIGYTLNRITLFALIFSIGILVD
DAIVVVENIHRYFTTTKFKPLEAAVRAVDEIGNPTMLATLAVIASILPMGFVGGLMGPYM
RPIPVGASMAMVFSLLIALIVTPYFAYRFMKGESHYGTEVAPEETWMTRFYRRMMGRFLH
DTKVRHGFLAMVVVLLVLSCSLIYFKAVTVKMLPFDNKSELQLIVDAPEGTTLEENARMV
AELGDALRKVPEVTDFQSYVGTSSPFNFNGLVRHYYLRQGPSVAEIQVNLESKDERSSQS
HDIAKRIRPTLKAITDRYGARLKVAEIPPGPPVLSTLVAEVYGPDQQSRVDIARKIREIF
RTTAGVVDVDWYQEDDQPTLRFQVDREKAALSGVDAAQVVQTLKMAVGGTDVGLMHVPQE
KEPVRINLRLPVGSRSDVSSLSSIYVAGSKGNVPLSELVRVVRGVEEKSLYRKNMKSVVY
VIGDVAGKIEAPVYAILKMHKDIDNIPLPGGYHIEQRAATQPWSEERPGIKWDGEWHITY
EVFRDLGAAFAAVMVLIYVLVVAWFRDFTTPLVIMAPIPLTLIGILPGHAIMGAFFTATS
MIGFIALAGIIVRNSIILIDFAELRRREGMALDEAIIDAGAVRFRPMLLTAAAVVVGSFV
ILFDPIFQGLALAMMCGEIASTTLSRITIPILYFMVQSWKEKHKKQVEVV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcggcttcgcggggaggattgcccgcgctttcatagattccaagctgacg
ccgctcatcgtggcggcttcgctcctgatcgggctctactcggtcatcgcgacgccgcgc
gaggaggagccgcagatcgtggtccccatggtggacatctacctccccatgcccggctcc
tcaccgaaggaggtcgaagagcgggtggtgaccaccttcgagaagaagatctgggagatc
aacggcgtcgagtacatatactccgccagccgccaggggatgggcatcatcacggtccgc
ttcctcgtcggcgaaagcatggaagactccctggtcaagctctacaacaaggtgatgagc
aaccgcaacctcctcccgcccggcgcgggggagccgctggtggtctccaaatccatagac
gacgtcccgatcctgtcgctcaccctctggtcggaccgctacgaccacaacgccctgcgc
cgcgtggcccgcgaactgtgcgacgacctgcagaaggtggagaatgtcgcccactccgag
atcaagggggggctgtcgcgcgaactgaaggtgcagctcgacccggcccggctcgcctcg
tacggccttaccccgctgacggtgatgggagccctggagaaggggaacgtgtcgcagcgg
gcggggaccttcgcctcggggaaccgcgagtacagcctggaagccggcggcttcatcgcc
gacccggccgacgccggtcgcctggtggtgagcgtgaaggagggccgtccggtctacctc
tccgatgtcgccaccgtgacggacggtgtgcaggaaccaaaggactacgtcttcttcggc
ctcggccccgccgcagcgcacaagagcctgaaagggggcgccgccgactatcctgcagtg
accatcgccatcgctaagcgcaagggggccaacgccacctgggtcgccgaagacctcctg
aagcgggtggagttccagaagggtaagctgatcccgtcggagatgcaggtcaccgtgacc
aggaactacggggagaccgccaaggacaagaacgacgagctgttgttccacatgttcctg
gcggccatctcggtcaccatcctgatcgcggtgttcatggggtggcgcgcgggcgccgtg
gcggccatcgcgattcccgtgacgctggcgctcaccatgttcatcttcaaccggatcggc
tacacgctgaaccggatcaccctgttcgcgctgatcttttccatcggcatcctggtggac
gacgccatcgtggtggtggagaacatccaccgctacttcaccacgaccaagttcaagccg
ctggaggcggcggtacgggcggtggacgagatcggcaatccgaccatgctggccacccta
gcggtgatcgcctccatcctccccatgggcttcgtgggcggtctcatgggcccctacatg
cgccccatcccggtcggcgcctccatggccatggtcttctcgctcctgatcgcgctcatc
gtcaccccctacttcgcctaccgtttcatgaagggggagtcgcactacggcaccgaggtg
gctcccgaagagacctggatgacccgcttctaccggcgcatgatggggcggtttctgcac
gacaccaaggtgcgccacggcttcctcgccatggtggtggtgctcctggtcctctcgtgt
tcgctgatctacttcaaggccgtgacggtcaagatgctccccttcgacaacaagagcgaa
ctgcagctgatcgtggacgcgccggaggggaccacgctcgaggagaacgcgcgcatggtg
gccgaactcggggacgcgctccggaaggtgcccgaggtgaccgatttccagagctacgtc
ggcaccagttcccccttcaacttcaacggcctggtgcgccactactacctgcgccagggg
ccgagcgtggccgagatccaggtcaacctggagagcaaggacgagcgcagcagccagtcg
cacgacatagccaaaaggatccgccccacgctgaaggcgatcaccgaccgttacggggcg
cggctcaaggtcgccgagatcccccccggaccgccggtcctttccacgctggtggcggag
gtctacggcccggaccagcaaagccgcgtggacatcgcccgcaagatacgggagatcttc
cgcaccacggccggcgtggtcgacgtcgactggtaccaggaggacgatcagcccacgctg
cgcttccaggtggacagggagaaggcggccctttccggtgtcgatgccgcccaggtggtg
cagaccctgaagatggcggtgggggggacggacgtcgggctcatgcacgtgccgcaggag
aaggagccggtccggatcaacctgcgcctgccggtaggctcccgcagcgacgtttcctcg
ctctcctccatctacgtggccgggagcaaggggaacgtgccgctatccgaactggtgcgc
gtggtgcgcggcgtagaagagaagtcgctgtaccgcaagaacatgaagagcgtggtctac
gtcatcggcgacgtcgcgggcaaaatcgaggcgccggtgtacgccatcctcaagatgcac
aaggatatcgacaacatcccgctgccgggcggttaccacatcgagcagcgcgccgctacc
cagccttggagcgaggaacgccccggcatcaagtgggacggcgagtggcacatcacctac
gaggtgttccgcgacctgggcgccgccttcgccgccgtcatggtgctcatctacgtgctg
gtggtggcctggttccgggacttcaccacgccgctggtgatcatggcgcccatcccgctc
accctgatcggcatcctgccggggcacgccatcatgggggctttcttcacggccaccagt
atgataggcttcatcgccctggccgggatcatcgtgcggaactcgatcatcctgatcgac
ttcgccgaactgcggcgccgggaggggatggcgctggacgaggccatcatcgacgccggc
gcggtccgcttccgccccatgctgctcaccgcggcggcggtcgtggtggggagcttcgtg
atcctgttcgacccgatcttccaggggctcgcgctggccatgatgtgcggcgagatcgcc
tccaccacgctttccaggatcaccatcccgatcctgtacttcatggtgcagtcctggaag
gaaaaacataagaagcaggtcgaggtggtttaa
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