Geomonas paludis: M1B72_14530
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Entry
M1B72_14530 CDS
T08160
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gpl
Geomonas paludis
Pathway
gpl01501
beta-Lactam resistance
gpl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_14530
01503 Cationic antimicrobial peptide (CAMP) resistance
M1B72_14530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_14530
01504 Antimicrobial resistance genes [BR:
gpl01504
]
M1B72_14530
Transporters [BR:
gpl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M1B72_14530
Antimicrobial resistance genes [BR:
gpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M1B72_14530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
SecD_SecF_C
MMPL
CIDE-N
Motif
Other DBs
NCBI-ProteinID:
UPU34658
UniProt:
A0ABY4LDM1
LinkDB
All DBs
Position
complement(3425477..3429901)
Genome browser
AA seq
1474 aa
AA seq
DB search
MTPIKFSLRYPPVTLILTAMVVFIGIHAFLKMQRTEDPTITIRTGLVAAMYPGATSEQVE
KQVTKTLEKHIFKFPEVRKEKTYSTSRPGVAIINVELEDSVKNSDQFWAKLRHEMNLVRT
TELPAGVMGPVVDSDFGDTVAMLVAVHGKRYGYRELRDYADKIHDEMRTVREVGKLVTYG
NQSEEVRISGSLERVAQYFADPRQIVNALRERNVIQSGGHFEAERSKSPMRTTGIFNTEE
DIRNVLVDVSKDGHPLYIKDFATVERRYQDPTFMVRYDGDPCLLLSVEMQKGKNIVELGD
RLDTVFQRLKVLLPPDVKLDLVANQPEVVKDRTEKLSHEFLLAIVSVVLVTIVLLPLRVA
LIAALAIPVTLCGTLGVMNAFGIALHQVSIAGLIMVLGIVVDDAIVIADNFVELLDHKVP
KAEAAWRCASDVLVPVLTATITIIASFLPLLILTGSVGEFIMALPLTVAIALAVSFIVAV
FLTPLLCRFFIKKGLHDHDAAHDHKKEKKSLLDLLQDKYGIWIGTFMNRKWLAFALGGCA
FVFGVALFAVVPQQFFPSAERNQFVVDVWMPQGTRIEATDAVMGRIEKALAKSKGVAHYA
TFVGQSAPRFYYNVNPQQPDGAYGQFIVNTASVEDTSRLVQELRPALAKVAPEAMVIVKE
LQQGSQMEAPIEVRIAGDDIAELKRLGEQVQAILEGIPNTQYVFRDYFNDSYLVDVKVND
ELANRLGLTDAGVSQTLAGAFDGAAVSTFWEGDRAVDIKLRLDPASRSSFSDIGNTYLNS
DLTRARVPLRAVATLAPEWQTGRIVRRNGVHTLTIRAFPKTGVYASDILEQAMPRIKALD
LPTGYRIYYGGEKDNQDETFPQMLAALGISLVAIFLVLLVQFRNVSDPLVVMASIPLTLF
GAILGLVITHNPFGFTAFMGLISLCGIVVRNGIILVDYCNERVAEGVSLEQAAREAGARR
LRPIFLTTMAAAVGVTPMILSRSSLWSPLASVIAFGLIFSMFFTLLVVPVIYVAVKSRVA
RRASVQEGVVAAALVGLVLLAGGREASAEPVRQSLTLSQAVELALKQNSVLKMGRDKVAE
TDHRIASVRSQYFPQLTNNTKFMSLSDKQQISIPAGSLGGAGGEQFPNREVKLSQSKSTV
LYSETTLAQPITQLFKIGAASDIAKAERGIAKAELSKSENETVFAVHELYYALLVADKER
SAAQASLDAAQENLREAEEGVKAGNVLEVALTAARADLLQNRQALLVADNRAADVTSELC
DLLGLPSDTTVEVTEAGLPELTKPVKEQAYEEARSGNGEMLAARQTLEKSRHAVRAAGYE
YIPDLTIYARHGYQDGAPFLEKNVGIVGAELTWNIFDWGKRKADIGQRAAQQSQAEENLA
RIDKRIGIDIDKALRKLERSQQMVEVAREALSLRRENARLSDNRLKAGTVTAAKHAEAVA
ALKRAEMDELQASLAYRLAQAELDRIRGVLASSR
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgataaagttttcccttcgctatcccccggtcaccctcatcctgacggccatg
gtcgtattcataggcatccatgccttcctgaagatgcagcgcaccgaggacccgaccatt
accatcaggaccgggctcgtggccgccatgtatcccggcgcgacctccgagcaggtggaa
aaacaggtgaccaagaccctggaaaaacacatcttcaagttccccgaggtccgcaaggag
aagacctattccacgagccgccccggcgttgccatcatcaacgtggaactcgaggacagc
gtgaagaactcggaccagttctgggccaagctgcgccacgagatgaacctggtgcgcacg
accgaactccccgccggggtgatggggccggtggtcgattccgacttcggcgacacggtg
gccatgctggtggcggtccacggcaagaggtacggctaccgcgagctcagggactacgcc
gacaagatccacgacgagatgcgtacggtccgggaagtgggcaagctggtgacctacggc
aaccagtccgaagaggtccggatcagcgggagccttgagcgggtggcccagtacttcgcg
gacccgcgtcagatcgtgaacgcgctcagggagcgcaacgtcatccagagcggggggcat
ttcgaggccgagcgatccaagtcccccatgaggaccaccgggatcttcaacaccgaggaa
gacatccgcaacgtgctggtcgacgtctcgaaggacggccatcctctctacatcaaggac
ttcgcgaccgtggagcggcgctaccaggacccgaccttcatggtgcgctacgacggcgac
ccctgtctcttgctctcggtggagatgcagaaagggaagaacatcgtggaactgggtgat
cggctcgataccgtgttccagcgcctcaaggtgctcctcccgcccgatgtgaaactggac
ctggtcgccaaccagcccgaggtggtcaaggaccgcaccgagaagctgagccacgaattc
ctgctcgccatcgtttccgtggtcctggtgaccatcgtgctgctccccctcagggtcgcc
ctcatcgccgccctcgccattccggtcaccctgtgcggcaccctcggtgtcatgaacgcc
tttggcatcgcactgcaccaagtttccatcgcaggcctcatcatggtgctcggcatcgtg
gtggacgacgccatcgtcatcgcggacaacttcgtcgagcttttggatcacaaggtcccc
aaagccgaggcggcgtggcgctgcgccagcgacgtcctggtgccggtactcaccgccacc
atcaccatcatcgcgtccttcctccccctgctgatcctgaccgggtcggtgggcgagttc
atcatggcgctgccgcttaccgtggccatcgccctggccgtttccttcatcgtggcggtg
ttcctgaccccgcttttgtgccggttcttcatcaagaaggggctgcacgaccacgatgcg
gcgcacgatcacaaaaaggaaaagaagagtctgctcgatctgctccaggacaagtacggc
atttggatcggcaccttcatgaacaggaaatggcttgccttcgcactgggcggctgcgcc
ttcgtcttcggcgtagccctcttcgcggtggtgccgcagcagttctttccgtcggcggag
cgcaaccagttcgtggtcgacgtctggatgccccaggggacgcgcatcgaggcgaccgac
gcggtgatgggacggatcgagaaggccttggccaaaagcaaaggtgtcgcccactacgcc
accttcgtggggcagagcgcgccgaggttttactacaacgtcaatccgcagcagcctgac
ggggcctacggacagttcatcgtcaacaccgcctcggtggaggacaccagccggctggtg
caggagctccgtccggccctggccaaggtggcgccggaggcgatggtgatcgtcaaggag
ctgcagcagggatcccagatggaggcccccatcgaggtgcgcatcgcaggcgacgacatc
gccgaactgaagcggctcggtgagcaggtgcaggcgatcctggaggggatacccaacacc
cagtacgtgttcagggactacttcaacgactcctacctggtggacgtgaaggtgaacgac
gagctggccaaccggttggggctcaccgatgcaggcgtgtcgcagaccctggctggcgcc
ttcgacggggccgccgtcagcaccttctgggaaggggaccgcgccgtcgacatcaagctg
aggctcgaccccgcctcccgttcctccttctcggacatcggcaacacctatctcaattcc
gacctgacccgggcccgggtgccgctgcgcgcggtcgcaacgctggcgcccgagtggcag
accggcaggatcgtgcgcagaaacggcgtgcacacgctgaccatccgggccttcccaaaa
actggggtgtacgcctcggacatcctggaacaggcgatgccgcgcatcaaggccctggac
ctgcccaccgggtaccggatctactacggcggcgagaaggacaaccaggatgagaccttc
ccgcagatgctggcggcgctcggaatcagcctggtggcgatcttcctggtgctgttggtg
cagttcaggaacgtctccgacccgctggtggtgatggcctccatcccgctcaccctgttc
ggggccatcctcggactggtgatcacccacaaccccttcggcttcaccgcgttcatgggg
ctcatcagcctgtgcggcatcgtggtcagaaacgggatcatcctggtcgactactgcaac
gagagggtggccgagggggtaagcctggagcaggcggcgcgtgaggcgggggcgaggcgt
ctgcgtcccatcttcctcaccaccatggcggcggccgttggcgttacgcccatgatcctg
tcccggtcgagcctgtggagcccgctggcgagcgtcatcgccttcggtctcatcttctcc
atgttcttcacgctcctggtggtcccggtgatctacgtggcggtgaagtcgcgggtagcc
cggcgcgcctcggtgcaagagggagtcgtggccgcagcactggtggggctggtgctgctc
gcgggggggagggaagcaagcgctgagccggtgcggcagtccctgacgctgtcacaggcg
gtcgagctcgccctcaagcagaactcggtcctcaaaatgggccgggacaaagtcgccgag
accgaccacaggatcgcgtcggtacggtcccagtacttcccgcagctcaccaacaacacg
aagttcatgagcctgtccgacaagcagcagatctccatcccggcggggagtctcggcggc
gcgggaggcgagcagttccccaacagggaggtgaagctcagccagagcaagtccaccgtg
ttgtacagcgagaccaccctggcgcagccgatcacgcagctgttcaagatcggggcggcc
agcgacatcgccaaggcggagcgcggcatcgccaaggcggaactgtccaagtccgaaaac
gaaaccgtctttgccgtgcacgagctgtactacgcgctgctcgtggccgacaaggagcgc
tccgccgcccaggcttcgctcgatgcggcccaggaaaacctgcgcgaggcagaggagggg
gtgaaggcgggcaacgtgctggaggtggcgctgaccgcggcgcgggcggatctgctgcag
aaccggcaggcgctcctggtcgccgacaaccgtgccgccgatgtgacctcggagttgtgc
gacctcttggggctgcccagcgacaccacggtcgaggtcaccgaggccgggcttcccgag
ctgacaaaaccggtgaaggaacaggcctatgaggaggcgcgctccggcaacggcgaaatg
ctcgccgcgcgccaaaccctggagaaatcgcgccacgcggtgcgtgccgccggctacgag
tacatccccgacctgaccatctacgccaggcacggttaccaggacggcgcgccgttcctg
gaaaagaacgtagggattgtcggggcggagctcacctggaatatcttcgactggggcaaa
cgcaaggcggatatcgggcagcgtgcggcccagcagtcccaggctgaagagaacctggca
cggatcgacaagcggatcggcatcgacatcgacaaggcgctgcgcaagctggagcgctcc
caacagatggtggaggtggcgcgcgaggcgctctccctgcgccgggaaaacgcgcgcctg
agcgacaaccgcctgaaggccggcaccgtgaccgcggcgaaacatgccgaagccgtcgcc
gcactgaaacgggcggagatggacgagttgcaggcctcgctggcctaccggctggcacag
gccgaactggaccggatcaggggcgtactcgcttccagccgctag
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integrated database retrieval system
