KEGG   Paraglaciecola psychrophila: C427_0391
Entry
C427_0391         CDS       T02535                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
gps  Paraglaciecola psychrophila
Pathway
gps02024  Quorum sensing
gps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C427_0391
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C427_0391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gps03019]
    C427_0391
   03036 Chromosome and associated proteins [BR:gps03036]
    C427_0391
Messenger RNA biogenesis [BR:gps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     C427_0391
Chromosome and associated proteins [BR:gps03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    C427_0391
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AGH42501
UniProt: K7AEL4
LinkDB
Position
complement(386050..386295)
AA seq 81 aa
MAKGQSLQDPFLNALRKERIPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRAIPMPTVGQTESDED
NT seq 246 nt   +upstreamnt  +downstreamnt
atggcaaaagggcaatcattacaggacccattcctcaacgcgctgcgcaaagagcgcatc
cctgtatccatatatttggttaacggtattaaacttcaaggtcaagttgaatcgttcgac
caatttgtgattttacttaaaaatactgtaagccaaatggtttacaaacacgcaatttct
accgttgtaccatcgcgcgcaattccaatgcctacggttggtcagacggaatcagacgaa
gactaa

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