KEGG   Paraglaciecola psychrophila: C427_1123
Entry
C427_1123         CDS       T02535                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
gps  Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:gps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gps03400]
    C427_1123
Enzymes [BR:gps01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C427_1123
DNA repair and recombination proteins [BR:gps03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C427_1123
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 AAA_11 Viral_helicase1 DUF6985
Other DBs
NCBI-ProteinID: AGH43232
UniProt: M4RXM4
LinkDB
Position
complement(1045626..1048286)
AA seq 886 aa
MNSIVPSIFGRIFSNKIPLAFNEHALAVTHNKTNQQIQWSEVTTPLSFKFGFLGQTIHFS
TADQNVTLTMMGYHSDHFLKTRFDQYWVNANIAKLDALLEKIANILSHGFLRQSRISDIK
SLALQERSRWFPWIKESNSLALIEKKIQLLDKYSKWDNVATHFFQHRYVKEQLQHHKSFF
DQVESNPLTERQRTACIIDDDNNLLLAGAGTGKTSVMIARAGYLVQSQQAKYDDILLLAY
GRKAADEMNQRIQDKLTTDKIKAATFHSLGLSIISQVEGGRPSLSVFAEDEKVKAEWLHN
SFESLIENQSEYRARVLDYFSQYYYVEKNDFDFQTLGDYYHYLNDNDILSLKGDKVKSFG
ELYIANWLFYHGIDYEYAAAYQFDVKTVARRQYKPDFYLPEYELYIEYYGVDEAGNTAPY
IDKDQYHASIAWKKATHQRYNTRCVTLTYAQHKQDTLLNELQNALSEHKIDYEILPIESI
LASLRETGRISVLAELFGKLLGLYKAADLDEKAQTDIINRAEDTKQAETALALLKPIMSS
YNHHLHQRDEVDFEDMIIKAIDYVESGLFTSPWRCIMVDEFQDISKPRARLVKALRDNNN
GSSVFAVGDDWQAIYRFSGADIRLTTQFAKYFGLTTQTELDVTFRFNNKIGQVTSDFISK
NPAQLHKTITSLTHVATPAISLLRRGDHTVANYQSSLIELSNGAVDDVLQAIYSKTCKPV
TVYLLARFGFKLPSHADIQTLSAKYPLLKMQAHTFHAAKGKEADYVVIIGLQKGKHGFPS
EKATPAILDALLPPQEDYPHAEERRLFYVALTRARHRVYIIADMANTSGFVQELMAEHDI
ELDEFSSENEQVYTDDINCMRCDTGVVKKTNWSLWYFLLLFFISSM
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgaattctattgtacccagtatattcggtcgaatattttctaataaaataccattagct
tttaacgagcatgccttagcagttacacacaacaaaaccaaccagcaaattcaatggagt
gaagtgaccactccattatcttttaagtttggttttttgggtcaaactattcatttttcg
actgctgaccaaaacgtcacgttaacgatgatgggttatcatagtgatcactttttaaaa
acgcgtttcgaccagtattgggtaaacgcgaatatagctaaacttgatgctttacttgag
aaaatagccaacattctgagccatggttttttgcgtcagtcacgcatcagcgacattaaa
tccttagcgctgcaagagcgtagtcgctggtttccatggattaaggaaagtaacagctta
gcgttgatagaaaagaaaattcaattattagacaaatactcaaaatgggataatgttgcc
acccattttttccaacaccgctatgtaaaagaacaactacagcatcacaaatcatttttc
gatcaggttgaatccaaccctttaactgagcgacaacgcacagcgtgcattattgacgac
gataataatttattactcgcgggtgctggaaccggaaaaactagcgtaatgatcgctaga
gcaggctatttggttcagagccagcaggcaaaatatgatgatattttattacttgcctac
ggtcgcaaagccgctgatgaaatgaatcaaagaattcaagataaactgaccacagataaa
ataaaagcagccacatttcatagtctaggacttagcatcatttcacaagtcgaaggagga
agacccagcctttcggtgtttgctgaagatgaaaaagtcaaagctgagtggttacacaat
tcttttgaatctctgattgaaaaccagtcagaatatcgagcacgggtgttagattacttc
agtcaatattattatgtagaaaagaatgattttgactttcaaacccttggcgattattac
cactacttaaatgataacgatatccttagtcttaaaggagataaagtaaaaagctttggt
gagctctatattgccaactggcttttttatcatggcatagattacgaatacgcagcagca
tatcaatttgatgtaaaaacagtggcgcgcaggcagtataaacctgacttttacttgcct
gaatatgaactttatatcgaatattatggcgtcgatgaagcaggtaatactgcgccgtat
attgataaagaccaataccacgcatctatagcgtggaaaaaggccacacatcaacgttat
aacactagatgtgtaacgttaacttatgcacagcataagcaagatactttattgaacgaa
ctgcaaaacgctttatctgaacataaaattgactatgaaattttgcctattgaatccatc
ttagcaagcttaagggaaacgggaagaataagcgttttagctgagcttttcggtaaatta
ctcggactttataaagccgcagatttagatgaaaaagcccaaacagatatcatcaacagg
gccgaggatactaaacaagcagaaacagcattagcattgcttaaacctataatgtcatct
tacaaccaccatttacatcagcgagatgaagtcgactttgaagacatgattatcaaggcg
atagattacgttgaatctggtctttttacatctccatggcgatgcattatggtggatgag
tttcaggatatatctaagcctagagcgagattagtcaaagcactgcgtgataacaataat
ggtagctctgtttttgctgttggtgatgattggcaagctatctatcgatttagtggcgca
gacataagattaaccacccaatttgcaaagtactttggcttgactacgcaaaccgaacta
gatgtaacgtttcgctttaataataaaatcgggcaagtcacctcagacttcattagtaaa
aaccccgctcaactacacaaaacaatcacctcgctaacccatgttgccacacccgcgatt
tcactattaagaagaggggatcacacagtcgctaattatcaaagctcactaatagaatta
tctaacggcgctgtagacgatgtattacaggctatttactcgaaaacatgtaagcccgtt
accgtatatttgttagcacggttcgggtttaaacttccaagtcatgctgatattcaaaca
ctcagcgctaaatatcctctattaaaaatgcaagctcacacctttcatgccgccaaaggt
aaagaagcagattacgtggtcatcatcggcctgcaaaagggtaaacatggctttccttcc
gaaaaagccacaccggctattttagatgcacttttacccccgcaggaagattacccccac
gcagaagaaaggcgacttttttatgtcgcactcacgcgcgcaagacatagggtttatatt
attgcagatatggccaataccagtggttttgtgcaggagctaatggcggagcacgatata
gaactagacgagttcagcagtgaaaacgagcaagtgtataccgatgatattaattgcatg
cgttgcgatactggcgtagttaaaaaaacaaactggtcgttatggtattttttattgttg
ttctttatttcctcgatgtag

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