KEGG   Paraglaciecola psychrophila: C427_1906
Entry
C427_1906         CDS       T02535                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gps  Paraglaciecola psychrophila
Pathway
gps02024  Quorum sensing
gps03060  Protein export
gps03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C427_1906
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C427_1906
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C427_1906
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gps02044]
    C427_1906
Enzymes [BR:gps01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C427_1906
Secretion system [BR:gps02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C427_1906
  Eukaryotic Sec-SRP protein
   C427_1906
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_30 cobW AAA_31 T2SSE NAT10_TcmA_helicase AAA_33 AAA_14 KAP_NTPase Mg_chelatase nSTAND_NTPase5 KTI12 YqeC ABC_tran AAA_16 TsaE Fe-ADH NACHT ATP_bind_1 APS_kinase Thymidylate_kin
Other DBs
NCBI-ProteinID: AGH44015
UniProt: K7A718
LinkDB
Position
1809041..1810426
AA seq 461 aa
MFENLSERLGKTLKNLSGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFIGQVKERAV
GTEVSKSLNPGQVFIKIVQSELESVMGQVNESLNLAAQPPAVVLMAGLQGAGKTTSVGKL
AALLKQREKKKVLVVSVDVYRPAAIKQLETLAKEVDVEFFPSSEDQKPIDIANAAIDFAR
KHFFDVLLVDTAGRLHVDGEMMGEIQALHKAINPIETLFVVDAMTGQDAANTAKAFNDSL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKLDALEAFHPERIASRILGMGDV
LTLIEEVERKVDKDKAQKLAQKVQKGKGFDLQDFKEQLEQMRNMGGMMSMMDKMPGMGNM
TAQIKEKANDKSFVQMESIINSMTPGERTRPDVIKGGRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMSNMKGMMPPGGPGGMGGMPPSR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtttgaaaatcttagcgaacgcttaggcaaaacccttaaaaatcttagcggaaaaggg
cgactcaccgaagataatatcaaagataccttacgtgaagtgcgtatggcattacttgaa
gctgatgttgccttacctgtcgtaagagattttattggccaagtaaaagagcgtgcagta
ggcaccgaagtcagcaaaagcctaaatcctggtcaggtttttataaaaattgtccaatcc
gagctagagtcggtaatggggcaggtcaacgaatcactgaatttagctgcacaacctcca
gcagtcgtattaatggctggtttgcaaggagcgggtaaaactaccagtgtgggtaagtta
gctgcgctattgaagcagcgcgaaaagaaaaaagtactggttgtcagtgttgatgtatat
cgtcctgctgcaatcaaacagctagaaacattagcgaaagaagtcgatgttgagtttttt
ccttcatcagaggatcaaaaaccgattgatattgctaatgctgcaatagattttgctcgt
aaacatttctttgacgtattgctagtggataccgctggtcgcctacacgttgatggtgaa
atgatgggagaaatccaagcattacacaaagctattaaccccattgaaacgttgtttgta
gttgacgccatgacggggcaagatgcagcgaatacagccaaagcatttaacgattcatta
cctttaaccggcgtaattctaaccaaagccgatggtgatgctcgtggcggagcggcgtta
tcggtcaggcatattactggaaaaccgattaaatttatcggtatgggcgaaaaacttgat
gctctcgaggcatttcatccagagcgtattgcctcgcgtattttggggatgggtgatgtt
ctcaccttgattgaagaagttgagcgcaaagttgataaagataaagcgcagaaactagct
caaaaggtacagaaaggtaaaggcttcgatttacaggacttcaaagaacaactggagcaa
atgcgtaacatgggcggcatgatgtcgatgatggataaaatgccaggtatgggcaacatg
acagcgcaaattaaagaaaaagcgaacgataaatcttttgtgcaaatggaatcgatcatc
aattcaatgacgcctggcgaacgcacccgccctgacgtaataaaaggtgggcgtaaacgc
cgcatagcagccggatcaggtacacaaattcaagacgtcaacagattgctaaaacaattt
actcagatgcaaaaaatgatgaaaaaaatgtcgggcggcggcatgaaaaaaatgatgagt
aatatgaaaggcatgatgccaccgggtgggcctggaggaatgggcggcatgcctccttct
cgttag

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