Paraglaciecola psychrophila: C427_1921
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Entry
C427_1921 CDS
T02535
Symbol
lcyB
Name
(GenBank) FAD dependent oxidoreductase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00906
Carotenoid biosynthesis
gps01100
Metabolic pathways
gps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
C427_1921 (lcyB)
Enzymes [BR:
gps01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
C427_1921 (lcyB)
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_3
NAD_binding_9
DAO
HI0933_like
Pyr_redox_2
Melibiase
NAD_binding_8
BBP7
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
AGH44030
UniProt:
K6YV65
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Position
complement(1826836..1828014)
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AA seq
392 aa
AA seq
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MSYDYDLIIIGAGAAGLSLLLALDETKYTQSVKIIERSSGPQNDRIWSFWNNNSVPDYLK
EIITREWQTWAISTDDSSFSMSHTYHRYCSIRSESLMKLALERIQIKTHFDIEFDSDVMS
VDSVNDHALVTTQRSHLTARWVIDTRPPPLKTDHNGLLQCFYGEEIVTEGEVFNPSSVKL
MQQLASSELGIEFIYILPFSANHALVEFTCFSPIALERSVLQARLKTRMQEIVGSQKYKV
ERKECAMLPMYNVNENTNNKNRHIIYAGIAGGAMRASTGYSFLACQRWAKQCASELKSRQ
SLSASTPLSLFTPISSVYRKMDRLMLTVLRNDMGIGVTIFVQMFKKVKPARFARFMTEQA
TIIDFMCVIWAMPKFAFLRALFSRGKWSGRVE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatgactatgatttaatcatcattggagccggagctgctggtctgtctctactt
ttagccctcgatgagacaaaatatactcaatcagtcaaaattattgaacgtagttctggc
cctcagaacgaccgaatttggagcttttggaataacaattcagttccagattacctcaaa
gaaatcattacacgcgagtggcaaacatgggctatttcaacagacgacagtagtttttct
atgtcccatacgtatcatcgatactgctccattaggtctgaatcgctgatgaaattagca
cttgagcggatccaaataaaaacccactttgatattgaatttgatagtgacgttatgtct
gtggattcagttaatgaccatgcattggtgacaactcagcgcagccatttaacagctcga
tgggttattgatacacgccctccaccattaaaaacagatcataatggactccttcagtgc
ttttacggtgaagagattgttaccgaaggtgaggtgtttaatccttcttctgtcaaacta
atgcaacaattggcaagctcagaactgggaatagaatttatatatattttgcctttcagt
gccaatcacgccttagttgagtttacctgtttcagtccgattgccttagagcgctcagtt
ttgcaggcacgccttaaaactagaatgcaggaaatagtaggctcacagaaatataaggtt
gagcgaaaggagtgcgcaatgttgcccatgtataatgttaatgaaaataccaataacaaa
aaccgacatattatctatgctgggatagcgggtggcgcaatgagagcctcgactggatac
agttttctagcatgccaaaggtgggctaagcagtgtgcttctgagttaaaatctagacag
tcattatctgcatcaactccactatcattattcacacccatcagcagcgtttaccgaaag
atggatagactgatgttaactgttttaagaaatgacatgggcatcggtgtgactattttt
gtgcagatgtttaaaaaagttaaaccagcacgttttgcgcgttttatgacagaacaagcg
actattattgatttcatgtgtgttatatgggctatgccaaaatttgcattcttgcgcgct
ttattttcccgagggaaatggagtggcagagttgagtaa
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