Gossypium raimondii: 105780182
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Entry
105780182 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780182
KO
K19022
AP-5 complex subunit beta-1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105780182
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
105780182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
105780182
NCBI-ProteinID:
XP_012459818
UniProt:
A0A0D2S4Z6
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Position
4:complement(357370..362313)
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AA seq
1115 aa
AA seq
DB search
MAEKPPPKPILPQDWESLVEDFQYGGFRREKWRSLSPSVVELALSSILKKEFPFKIPLVI
FLDEFSDLLFPQDPSLASLMDRLVETLRAVVQSPNDGVHVTYALKEQMMVSTTSILISTN
SVESVEVRFTESVVELLLAVINRPNHGPDRHARATACECLRELEKAYPCLLSDIAGHLWS
LCQSERTHASQSYILLFTTVIHSIVNRKLSVSILNTSVPLIPFNVPQCVVELEKEGLLEL
NYKELRRAMSFLLEWPQVLTPCGMMIFMGMIMPLAVALDLQPSMLKVQFFGMIYSFNPLL
YHVVLVMYSHFSEAFNEQEIEIVRRLYLVSLETQQHLVFRLLSVHWLMVFLNRLMVGRKK
SIVETGFMFYPSVFDPLSLKALKLDLLAFCSVCINKLNPQSVSDMEGNSVVKLFQGGLVS
VLGFKWLPPWSMETAVAFRTFHKFLIGASSHSEADPSTTTALMESAIFNHLKGMFVDLIL
EFQRLVPVIVAFIDRLLGCQKHLWLGERLLQTIDANLHPRVAIDYRLVSYFPIFDRIAEN
QTIPPRRLLELLTKFMAFLVEKHGPDTGVKSWSRGSKVLGICRTMLTHHQSSRLFLGLSR
LLAFTCLYFPDLEVRDHARIYLRMLICVPGVKLRGMLNLGEQLLGISPSSHSGSFFNVPS
PRHSQDPKKLKNIASYIHLERMIPLLVKQAWSLSLLPLRVGSNKMDFSGGFRDGEASTDE
RELDANIQVETVLDGQVTDKPQAPLYVMDSKVSEILAILRRHFSYIPDFRHMPGLRVKIP
CYLRFDAESFNNVWGDESPKSGLHGVDALPAIYATVLKFSSLAPYGSIPTCHIPFLLGQP
PTSGDFRDENVSLDIVATLDGDGGREEDIYKAPAMIELEPREPTPGMVDVFIETNGEDGQ
IITGQLQSITVGIEDLFLKAIAPPDIREDVLPDYYSDLFNALWDACGTTSNTGREIFPLK
SGKGFAAIHGTRSVKLLEIPPYALIRATEHYLAPFVVSVSGDRLIDMVKDNGIIRDVVWQ
DEASGHLLEAPTSVAEPDSMPLYLTLVENEEEQESQLNIGKRSIGCIHVLIFLPPMFHLL
LQMEVSDASTLVRIRTDHWPCLAYIDDYLEALFLS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccaccgccaaaaccgattttacctcaagattgggaatctttagttgaa
gatttccagtacggcggtttccgccgcgagaaatggcggtccctttccccttccgtcgtc
gaactcgccctttcatcgatcctcaaaaaggaattccctttcaaaatccctctcgtaatc
ttcctcgacgaattttccgatctattgttcccccaagatccatcactcgcttcccttatg
gaccgcctcgtcgaaaccctacgcgccgttgtccaatccccgaacgacggtgtccacgtc
acttacgcattgaaagaacagatgatggtttcgacgacctcgattttgatctccaccaac
tcagtcgagtccgtcgaggttcggtttacggaatccgtggtcgaacttttattagcggtt
ataaaccggccgaaccatggaccggaccgccacgcacgtgccactgcttgtgagtgtcta
cgtgagttggagaaagcttacccttgtttactctctgatattgctggtcatttatggagc
ttatgccaaagcgaacgaacccatgcttcgcaaagttacattttgttgtttacaactgtg
attcatagtatcgtgaatcgaaagttaagtgtttcaattttgaatacttcggttcctttg
attccttttaatgtaccgcaatgcgttgtagaattagaaaaggaagggttgttagagttg
aattataaggaattgagaagagcaatgtcgtttttattggaatggccacaagttttaact
ccttgtgggatgatgatttttatgggaatgataatgccattagcagtagctttagattta
cagccttctatgcttaaagttcagttctttgggatgatttattcatttaatcctttattg
tatcatgttgttttggtcatgtattcgcatttttccgaagcatttaacgagcaggaaatt
gagattgtgagaagactttatttggtttcattggaaacacagcaacatttggtgtttcga
ttgctttcagtgcattggttgatggtttttctgaataggttgatggtcgggaggaagaag
tcgattgtagaaacgggtttcatgttttatccgagcgtgtttgatccactttcgttgaaa
gcattaaagctagatttacttgctttctgttctgtttgtatcaataagttgaatcctcaa
agtgtttcagatatggaagggaattcagtagtgaagctctttcagggtggtctagtatcg
gttttgggtttcaaatggttgcctccttggagcatggaaaccgcagtggcattccgtact
ttccataagtttttgataggcgcatcatctcattccgaggccgatccttccaccaccact
gcacttatggaatctgccattttcaatcatttaaaggggatgtttgttgacttgatactg
gagtttcagagattggttccagtcattgttgcttttattgaccgtttgttaggctgtcaa
aagcatctttggttgggagaacgtctgcttcaaacgatcgatgcaaatctgcatccaaga
gttgcaattgattatagactagtttcatacttcccgattttcgataggattgctgaaaat
caaacaatacctccgcgtaggttgttagagctactaaccaagttcatggctttccttgtt
gagaaacatggaccagacacaggtgtaaaatcttggtctcggggtagtaaggtcctcggc
atttgcagaaccatgctaactcaccatcagagctctcgtttattccttggtttatcccgt
ctccttgcgttcacctgcctttacttccctgacttggaggttcgtgaccacgcaaggatc
tacttgaggatgctgatttgtgtacccggagtgaagcttagaggaatgctaaacctcggg
gagcaactccttggtatttccccctcgtctcattccggatcattcttcaacgtgccatct
cctcgacattctcaggatcccaagaaattaaagaacatcgcatcctatatccatctcgag
cggatgataccactacttgtcaaacaggcttggtcgttgtctttattacctttaagggtc
gggagtaacaaaatggatttttctggtggctttagggatggtgaagcctcgacagatgaa
agagaacttgatgccaatatacaagttgagactgtattagacggtcaggtaacggataaa
ccacaggcgccattatatgtgatggactcgaaagtttcagagattttagcgatattaagg
agacatttctcgtatattcctgattttagacatatgccggggcttagggttaaaattccg
tgctatttgagatttgatgcggagtctttcaataatgtttggggagatgagtccccgaaa
agtgggttgcacggagtagatgccctccctgccatatatgctacagtgttgaaattctca
tcgttggcaccatatgggtcgattccgacatgtcacataccctttcttctcggtcaacct
ccaactagtggtgattttcgtgatgaaaatgtttcactagacatcgttgctacactcgat
ggtgatggtggtagagaagaagatatctataaagctcctgcgatgatcgaattggaacca
cgtgagccaactcctggtatggttgatgttttcattgaaacaaacggggaagatggtcaa
atcatcacgggacagttgcaaagtattacggttggcattgaagatttgtttcttaaagct
attgccccaccagacatccgagaagatgttttacctgattactattcagatttgttcaat
gccttgtgggatgcatgtggtactacttccaataccgggcgggagattttccccttaaag
agtggcaaagggtttgcagccattcatggaaccagatccgtgaagttgcttgagattcct
ccatatgctttaattcgtgccactgaacattatctggcaccatttgtagttagcgtgagc
ggagatcgtctcattgacatggtaaaggataatggaattatcagagatgttgtttggcaa
gatgaagcctctggacatttgcttgaagcccccacctcagttgccgaaccggacagtatg
cctctttatcttactttagtcgagaacgaagaagagcaggaaagtcagttaaacatcggc
aaaagaagtatcggttgcatccatgtcttgatttttcttcccccaatgttccatctcttg
ttacaaatggaagtaagtgatgcttcgactttagttcgtattcgtaccgatcattggcca
tgcttagcttacatcgatgattacttggaggcattgtttttgtcataa
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