Gossypium raimondii: 105784554
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Entry
105784554 CDS
T04129
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105784554
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105784554
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105784554
NCBI-ProteinID:
XP_012465914
UniProt:
A0A0D2VC76
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Position
13:10308472..10310108
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AA seq
437 aa
AA seq
DB search
MGIAGYSYSWFLLSFFALIPTLRAHIAEYDKYWKARELEAIENLNKAYHPNPEEVVRHYN
DHFVNTMLEYNNTRRVLKGKKNGPCEITNPVDSCWRCDPNWVKNRKRLADCAPGFARGTT
GGKDGKFYVVTDPNDDIANPKPGTLRHAVTQLRPLWITFKKSMIIKLKQELIVTSDKTID
ARGANVHICYGAGITVQFSRNVIIHGLHIHHIKPATGGIIRDAENHIGLRTASDGDAISL
FGATNIWLDHLSLYDSSDGLIDVIQGSTAITISNCHFTDHNEVLLFGASDNYVADEKMQI
TVALNRFGKGLVDRMPRCRLGFFHVVNNDYTHWFMYAIGGSSHPTIISQGNRYIASSIYV
TKQVTSRGYLSPEQWNKWNWVSQGDHFINGAYFITSGDPNASKLFGAEKMMPFQPGRLVP
KLTRYAGTLHCRIGRPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggtattgctggttatagttatagttggtttttgttgtcatttttcgccctaatccca
acactaagagctcacatcgctgaatatgataagtattggaaagcacgagaattggaagcc
attgagaacctgaacaaggcttatcaccccaatccggaggaggtggtccggcattacaat
gaccactttgtcaataccatgcttgagtataataacaccagaagggtgttgaaaggaaag
aaaaacggtccctgtgagattactaaccccgttgatagttgttggcgatgtgatcctaac
tgggtaaagaacaggaagaggttggccgactgtgcccctggatttgctcgtggtactacc
ggtggaaaggacggcaagttttacgtggtcactgaccctaatgatgatattgctaacccc
aagcccggaactttacgtcatgcagtcactcaactcaggccactttggatcactttcaaa
aaatccatgatcatcaagctgaaacaggagctcattgttacaagcgacaagaccattgat
gcaaggggagctaatgtgcatatttgctatggtgctggtattactgtccagttttctagg
aatgtcattatccatggcctccatatccatcacattaaacccgctactggtggcatcatt
agggatgctgaaaaccacattgggttaaggactgccagcgatggagatgcgatctctctt
tttggagcaaccaatatttggcttgaccatctttccctttatgattcctctgatggtctt
atcgatgttattcagggttccactgccattaccatttcaaactgccatttcactgaccac
aacgaggtgctattgtttggagcaagcgacaactacgttgccgacgagaagatgcagatc
actgttgctttgaaccgcttcggtaaaggattggtggacaggatgcctaggtgtcgatta
ggtttttttcatgttgtcaacaatgactacactcattggttcatgtatgccattggcggc
agtagccaccctacaattatcagccagggcaataggtatatcgcgtcaagcatctacgta
actaagcaagtgactagtaggggctacttatcaccggaacagtggaataaatggaattgg
gtatcacagggtgaccacttcattaacggtgcctattttattacatccggtgatccgaat
gctagcaagctattcggtgctgaaaaaatgatgcctttccaacctggtcgattagtcccc
aaactcacaaggtatgccggaacactccactgcagaattggtcgcccttgttaa
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