Gossypium raimondii: 105788539
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Entry
105788539 CDS
T04129
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105788539
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105788539
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105788539
NCBI-ProteinID:
XP_012470935
UniProt:
A0A0D2NZH3
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Position
2:35754254..35756007
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AA seq
411 aa
AA seq
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MARTMAMAIPSLPLLFLFTFLLLLPLLISSSPVQDPELVVQDVHRAINASRRNLGYLSCG
TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL
RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH
GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRFTAPDNRFSKEVTKHEDAPESEWKSWNWRSEGD
LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggacaatggcaatggcgatcccttcacttcctcttctcttcctctttacattt
ctgcttctactcccacttctcatttcctcttcccctgttcaagaccctgagcttgttgtc
caagatgttcacagggctatcaatgcgtccaggaggaacctagggtatctctcctgtgga
accggaaaccccattgatgactgctggagatgtgaccccaactgggagactaatcgccag
aagctagctgattgtgccattggattcggcaagaacgccattggtggaagagatggtaag
atttatgtggtcactgactccggcgatgatgaccccgttaaccccaaaccagggacatta
cggcatgcggtgattcaagacgaaccgttgtggatcattttcgctcgtgacatgaccatt
cagctgaaagaagagctgataatgaactcattcaagaccatcgacggtaggggcgccagc
gttcatattgcagggggtccatgcattaccgttcagtatgtgaccaacattatcattcat
ggactcaacatacacgattgtaaacaaggagggaatgctatggtgagggactccccacgt
cactatggttggaggacgatatcagacggtgatggtgtttccatcttcggtggtagccat
gtttgggttgaccataactccttatcaaactgcaaagacggcttgattgacgctatccat
ggctccaccgctatcaccatttccaacaattacatgactcaccatgataaagtcatgtta
ttgggacacagtgattcctatactcaagacaagaacatgcaagtcactattgcctttaat
cactttggtgaaggccttgtccaaagaatgccacgatgtagacatgggtatttccacgtg
gtgaacaatgactatactcattgggaaatgtatgccattggaggaagtgctaacccaaca
ataaacagccaagggaatagatttactgcacctgacaacagattcagcaaagaggtgacc
aagcatgaggatgcaccggagagtgaatggaagagctggaattggagatcggaaggtgac
ctaatggtgaacggtgcattctttatcgcgtcgggtgctggcgcctcgtcgagctatgcc
aaggcttcaagcttgggtgctaggccatcttcactggtggcaacgataacgaccaatgct
ggtgcacttaattgcaagaaaggttcacgttgttga
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