Gossypium raimondii: 105789843
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Entry
105789843 CDS
T04129
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105789843
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105789843
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105789843
NCBI-ProteinID:
XP_012472626
UniProt:
A0A0D2RJK7
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Position
2:32259448..32261968
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AA seq
432 aa
AA seq
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MKVVKIVLFLGLIVYSPIVKGNIGHFDEVWQERAENAKKGAFKAYNPNPENVTSDFNRET
EKVLEGQNNTRRGLYKHHGPCLATNPIDRCWRCDPNWAKDRKKLVNCVLGFGRKTTGGKA
GRYYVVTDPSDNDMVNPKPGTLRHAVIQKEPLWIIFAHHMVIRLNQELIMAGDKTIDGRG
FQIHIVGGAQITLQFINNVIIHGLHIRNSVQAHGGMIRDSVDHYGQRTMSDGDGITIFGS
HNIWIDHLSMSKCYDGLIDILMASTAITISNCHFTNHNDVFLFGSSDSFSDDQIMQVTVA
FNHFGKGLVQRMPRVRWGFVHVVNNDYTHWLMYAIGGSKNPTILSEGNRFIAPPDKRAKE
ITKREYSPESVWKSWKWRSVNDLMMNGAFFVESGGPISRGNEKDVINAKTGASAGRLTRF
AGALNCVEHKPC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgttaagattgtattgtttctggggctaattgtatatagtcccatagttaaa
ggtaacattggtcattttgatgaagtgtggcaagaacgagctgaaaatgcaaagaaaggt
gccttcaaagcctacaatcctaatcccgaaaatgtaaccagtgatttcaaccgcgaaact
gagaaggtgttggaaggtcagaataacacaaggagaggactatataaacaccatggtcca
tgcctagccactaaccctattgacagatgctggagatgtgatccaaactgggctaaagac
cgcaagaagctagttaactgtgtcctaggattcggccgcaaaaccaccggaggcaaggca
ggtcgatattatgttgtaacagatccgtcagacaacgatatggtaaaccctaaacccgga
accttacggcatgcagtgatccaaaaagaacctctttggatcatatttgctcatcacatg
gtgattaggttaaaccaagagctgattatggctggtgacaagaccatagacggtcgagga
tttcaaattcacattgtgggtggtgctcaaatcacattgcagttcattaataatgttatc
atccatggccttcacattcgtaattcggtacaagctcatggtggcatgatacgagactcc
gttgatcattacggtcaacgtacgatgagtgacggtgatggaatcacgatatttggatcc
cacaatatttggatcgatcacctttctatgtccaaatgctacgatgggttaatcgatatt
cttatggcgtctacggccattaccatctctaactgccattttactaatcataacgatgtc
ttcctgtttggaagtagtgatagcttctcagatgatcaaatcatgcaagtaacggttgct
ttcaaccattttggcaaaggattggtgcaaaggatgccaagggtccgatggggattcgtt
catgtcgtcaacaatgactacactcattggctaatgtatgccattggtggtagcaaaaac
cctaccatcctaagtgagggcaaccgattcattgctcctccagacaaacgcgctaaagag
attaccaagagggagtattcaccagagagtgtatggaagtcgtggaagtggagatctgtg
aatgatctgatgatgaatggggccttctttgttgaatctgggggaccaattagtagggga
aacgagaaagacgtgatcaatgcaaagacaggagcttctgcaggcaggctaacacgcttt
gctggggctctcaactgcgtcgaacacaaaccctgttga
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