Gossypium raimondii: 105792240
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Entry
105792240 CDS
T04129
Name
(RefSeq) beta-adaptin-like protein C isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105792240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105792240
Membrane trafficking [BR:
gra04131
]
Endosome - Golgi transport
Others
AP-1 complex
105792240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
INTS1_R4
Atx10homo_assoc
Cnd3
Arm_2
Motif
Other DBs
NCBI-GeneID:
105792240
NCBI-ProteinID:
XP_012476173
UniProt:
A0A0D2S3N5
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All DBs
Position
8:complement(55013092..55019694)
Genome browser
AA seq
901 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQHRDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAVCVAKLYDINAELVEDRGFLESLKDLISDNNPMVVA
NAVAALAEIQEHSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKAADAREAEN
IVERITPRLQHANCAVVLSAVKMILLQMELISSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRRAVRAIGRCAIKLDRAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNMYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPPQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPDAFVTRAKTASQRTEDDDYPD
GNEKGYSANVGDGGASPSTSSSSVPYTAARRPSPAQVMPAPASPVPDLLGDLIGLDNNAM
VPADPPAMPSGPPLPILLPASTGQGLQISAQLARQDGQIFYSLMFENNSQITLDGFMIQF
NKNSFGLAAAGPLQVPPLAPGAAARTLLPMVLFQNMSPGPPSSLLQVAVKNNQQPVWYFN
DKILLHVFFSEDGRMERTSFLETWRSLPDSNEVLKEFPGIMVGSAETTMDRLAASNVFFI
AKRKHANQDVLYFSAKIPRGIPFLIELTTVIGNPGLKCATKTPNPELAPLFFEAIETLLK
I
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgattctaagtacttctcgacgacgaaaaagggggaaatccctgaactc
aaggaagagctcaattctcagcacagggataaaagaaaagatgctgtgaagaaggttatt
gctgcaatgacagttgggaaggatgtgtcatcactattcacagatgttgtgaattgcatg
caaactgagaatttggagctgaaaaagcttgtctatttgtaccttataaattatgctaag
agccagcctgaccttgcaattcttgcagtaaatacatttgtaaaggattcacaggatcca
aaccctctcattcgtgctttggctgttcggactatggggtgtatccgtgttgataagatc
acagaatacctctgtgatccccttcagcggtgcctcaaggatgatgatccatatgttcgc
aagacagctgccgtatgtgttgctaaactttatgacataaatgctgagttggttgaggac
aggggctttctggagtctctcaaggatttgatatctgacaacaacccaatggttgttgct
aatgctgtggcagctcttgctgagatccaagagcatagtagtagaccaatatttgaaatc
actagtcacacgctctcaaagcttcttactgctcttaatgaatgcacagagtggggtcaa
gttttcatacttgatgccctttctagatacaaggcagcagatgcacgtgaagcagaaaat
atagtggagagaattacgccacgacttcagcatgctaattgtgctgttgtactttcagct
gttaagatgatccttctacaaatggaacttatctctagcactgatgttgttcgaaatctt
tgcaaaaagatggctcctcctcttgtgacattactatctgcagaacctgagatacagtat
gttgcattgcggaatatcaaccttatagtacaaaagcggcctacaatccttgcccatgag
atcaaggtgttcttctgcaagtacaatgatccaatttatgtgaagatggaaaagttagaa
atcatgatcaagcttgcttctgaccgaaatatagaccaggttttattggaatttaaagaa
tatgccacagaagtagatgtagatttcgtcaggagggcagttcgtgccataggtcgctgt
gctatcaagttggacagagcagctgaacgatgcatcagtgttctgcttgagttgatcaag
attaaagtaaactatgttgttcaagaggctattatagttatcaaagatatctttagaaga
taccctaacatgtatgaatccatcatcgcaaccctatgcgagagcttggacactttagat
gagccagaagctaaggcatcaatgatatggataattggagaatatgcggaaagaattgac
aatgctgatgagctccttgaaagcttcttggagagtttccctgaagagcctccccaagtt
caactgcaactgctaactgcaacagtgaaactttttcttaagaagccaactgaaggaccc
cagcagatgattcaggttgtcttgaataatgctactgtggaaactgacaatcctgattta
cgtgaccgtgcatacatttattggcgtcttctatcaactgatcctgaggctgctaaggat
gttgtgttagctgagaaaccagtgattagtgatgattcaaaccaactggatccatctctt
ctggatgagcttcttgccaacatcgctacactgtcctctgtgtatcacaaacctccagat
gcttttgttacccgtgcgaagactgcatctcagagaactgaagatgatgactaccctgat
ggaaatgaaaaagggtattccgctaatgttggtgatggtggtgcatcaccttcaaccagc
tcaagtagtgtcccatatactgcagctaggcggccatctcctgcccaagtcatgcctgca
cctgcttctccagtgcctgatttgctaggcgatctgattggccttgataacaatgctatg
gtccctgctgatccgccagcaatgccttctggccctcctttgcctattttacttccagca
tctaccggacagggtttgcaaatcagtgcacagttagctcgacaagatggtcaaatattt
tacagtttaatgtttgagaataactcacagatcacacttgatggattcatgattcagttc
aacaagaattcgtttggtctggcagctgctggacctcttcaggttcccccattggcaccg
ggagcagcagccaggacactgctccctatggtattgttccagaatatgtctcctggtcct
cctagctcccttctgcaggttgctgtgaaaaataatcagcagccagtctggtacttcaat
gataaaatcttgttgcatgtgttcttttccgaggatggaagaatggagcgaactagtttt
ctcgagacatggaggtcactgcctgactcaaatgaggtcctaaaagaatttccaggcatc
atggtgggcagtgcagaaacaaccatggatcgactagctgcatcaaatgtgttctttata
gcaaagcggaagcacgcgaatcaggacgtattgtatttctctgccaagatcccccgaggt
atacccttcttgattgaacttacaacagtaattgggaaccctggtctgaagtgcgcaacc
aagactccaaatcccgagctggcaccactgttttttgaagccattgagacactcctgaag
atttga
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