Gossypium raimondii: 105793449
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Entry
105793449 CDS
T04129
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105793449
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105793449
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105793449
NCBI-ProteinID:
XP_012477813
UniProt:
A0A0D2R9B6
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Position
8:57229018..57230248
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AA seq
378 aa
AA seq
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MATILSRCLTWALFMVFLMASFSSSLANMNVIDKCWRGNPFWQSHRQQLAKCSIGFVGKM
INNIGKDVVKYKVTDPSDNPLSPKPGTLRYGTTMIKGKVWITFKNSMTITLQRPLLLSSF
TAIDGRGIDVHITGVGCLLVYQVTDIIIHGLRIHHCKAQPPSTVMGPNAKVIPLGQMDGD
AIRLVTARKVWIDHNTLYECQDGLLDVTRGSTNITISNNWFRNQDKVMLLGHDDGHLRDR
NMKVTVIFNHFGPNCNQRMPRVRHGYAHVANNFYQGWEQYAIGGSMSPSIKSEANFFVAS
NDVGNKEVTWRKGEKGLWKFYSVGDVFKNGASFSKQTGVGGAKPNYNREQDFKVVDAGSV
KELTSESGVLRCSRSLTC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatattatcaaggtgcttaacatgggctcttttcatggtttttctaatggca
agttttagttcaagtttggctaatatgaatgtaatcgataaatgttggagaggtaaccct
ttttggcaaagtcaccgacaacaattagccaaatgctctatcggtttcgtcggcaaaatg
atcaacaacatcggcaaagatgttgtgaaatacaaggtcaccgatccttctgataaccct
ttaagtcctaaaccaggaacccttcgttacggaaccacaatgatcaaaggcaaagtatgg
atcacattcaaaaatagcatgaccattacactccaaagaccacttctcttaagcagcttc
accgccatcgacggtcgtggtatcgacgtccacataaccggcgtcgggtgcctgctagtg
taccaagtgaccgatattatcatccatggtcttcgcatacaccattgtaaggcccaacca
cctagcaccgtgatgggtccaaatgcgaaggtgatccccttaggacaaatggatggagac
gctataagattggtcactgcaaggaaagtgtggattgatcataacacattgtatgagtgc
caagacggtctcctcgacgtcactcgtggttctacaaacattaccatatcgaataattgg
ttcaggaaccaagacaaagtcatgctccttgggcacgacgatggtcatttgagagacaga
aacatgaaggtcactgtcattttcaatcatttcggacctaactgcaaccaaagaatgcca
agagttcgccatggatacgcgcatgtagctaacaatttttaccaagggtgggagcaatat
gccataggtggaagcatgagccctagcatcaagagcgaagccaattttttcgtcgcttca
aatgatgttgggaacaaagaggtaacatggagaaaaggggaaaaaggtttatggaaattt
tattcagtaggggatgttttcaaaaatggagcatctttcagtaagcaaacaggtgtaggt
ggggcgaagcctaactataaccgagaacaggattttaaagttgtcgatgctggatctgtt
aaagaattgacaagtgaatctggtgttttaagatgctccaggagtttaacatgctaa
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