Gossypium raimondii: 105798387
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Entry
105798387 CDS
T04129
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105798387
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105798387
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105798387
NCBI-ProteinID:
XP_012483889
UniProt:
A0A0D2RWM1
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Position
9:complement(10019851..10021541)
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AA seq
407 aa
AA seq
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MGSSTFSYIFHILFISLLVPNLASSSPVQDPEFVVDEVHKSINASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKHAMGGKNGRIYVITDAGDDDPVNPRPGTLRHAVI
QDEPLWIIFKRDMVITLKQELLMNSFKTIDGRGASVHISGGPCITIHYVSNIIIHGIHIH
DCKPGGSTIIRDSPHHAGHWTPSDGDGVSIFGSKNIWVDHCSLSNCHDGLIDVIHGSTAV
TISNNYMTHHDKVMLLGHSDSYMQDKNMQVTVAFNHFGEGLIQRMPRCRLGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFLAPNDRSKKEVTKHENAPESEWKRWNWRSEGDLMLNG
AFFRQTGASGASSTFARASSLSARPSSLVGTMTMTAGALKCRRGSHC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtcaacattttcctatatctttcacattctcttcatttccctccttgttcca
aatctagcttcttcctcgccagttcaagatcctgaatttgttgttgatgaagttcacaag
agtatcaatgcttcgaggaggaacttgggttacttgtcatgtggaacaggaaatcccatt
gatgattgttggaggtgtgatccgaactgggagaagaaccggcaaaggttagccgattgc
gcgattgggttcgggaagcatgccatgggaggcaaaaatggtcgaatctatgttattacg
gatgccggcgatgacgacccggtgaaccctaggccgggtactttaaggcatgctgtgatt
caagacgagccattgtggattattttcaagagagatatggtgattacgttgaaacaagaa
ttgttgatgaactctttcaagacaatagacggtcgaggtgcgagcgttcacatatcgggt
ggaccatgcatcaccatccattatgtgtcgaacatcatcatccatggcatccacatacat
gattgtaaacccgggggtagtacaattataagagactctccccatcatgcagggcattgg
actccatcggacggtgatggtgtctcaatctttggcagcaagaatatatgggttgaccat
tgttcattgtcgaattgtcatgatggactcatcgatgtcatccatggatccaccgccgtg
actatatcaaacaactacatgacccatcatgataaagtcatgcttttgggccacagtgat
tcctatatgcaagataaaaacatgcaagtcactgttgcctttaaccatttcggggaaggt
ctaattcaaagaatgccaaggtgtagacttggatatttccatgtggtgaacaacgattac
acccattgggaaatgtacgccattggtggcagtgcaaaccctactatcaacagccaagga
aacaggtttctagcacccaatgatagatcaaagaaagaggtgaccaaacatgagaatgca
ccagagagtgaatggaaacgctggaactggagatccgaaggagacttgatgttgaatgga
gcctttttcaggcaaaccggtgcttctggtgcatcttcaacctttgctagggcttcgagc
cttagtgctagaccatcttctcttgtgggtacaatgacaatgactgctggcgcactcaaa
tgtagaaggggttcccactgctag
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