Gossypium raimondii: 105799618
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Entry
105799618 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105799618
KO
K14827
pre-rRNA-processing protein IPI1
Organism
gra
Gossypium raimondii
Pathway
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105799618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105799618
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105799618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
TOR1L1_N
TPR_DNAAF5
HEAT_2
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-GeneID:
105799618
NCBI-ProteinID:
XP_012485737
UniProt:
A0A0D2NSZ4
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Position
9:39690924..39701460
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AA seq
860 aa
AA seq
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MVRSKAPSKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIVLPEQSVATNKEGLA
VSKKGLTLKELLQQTSHHNAKVRRDALMGIKDLVLNHPAELRLHRYAVIEKLRERISDDD
KVVREALYQLFKSEIFPGCAEDNQGLLISLLMTYIFNAMTNLAIDIRMMAFKFFDLVVQY
YPPCFSLYAEKILQSYEDILRKNQYYLEDKGKLRTTLSGLVRCLSLLPSKKPESEKGISG
DRMIHAFEPDAPTANTGFSTIIKKLKDLVLVLINCFQDFIPLLISMPQLDAQSFDCILSI
LQSIDIAVRFFIYGTHEVAADSICNQTLSSPLSKKLLGVFPLYPKHHLSVKEDDRYFILN
IVITEIFLHLREWICPSANVFEKFLEFIENALLGTICSSTRSGKVAWEKHVPSLLPFIPK
LASEVETRWQLRILESFTQTFKGCNPESSLKLSCLSMIEEMLIPNGDKHYTEASDTVVLD
FQTVWIRELPSLLMLLGDRQPSSSQVVLRLLLRLGQFCGSNSFLFWDYENTQFALSEFYS
TCEEGNIYYGPFMRLPRDCQELSICCLYYFSNLSALLLKSVALCCLCPELELFVSFRIIE
VLHAAYKAGHIQIADHISFFMTLLSRFKVFPENIDPVRESDVKVSNHGAFKSLTSVLCSY
LSQMGDSSVVLQILDQAIIGLILLQPPLDNACAMLRVLILLDSKPTRLSEQSIIALSNFL
PGYLMDVVHCIPEDDVHTWRYYLLPCFFLFDRSNKVLKLVLDLIGSFLTDSNLSLPSDTS
TRYATDNLSRINATISLLLLMYKDIKVQKIISLFRTEVSSILKSIASLQSSEVKMTLEER
HRFQCSFEQLKVVTSTSPAG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcgaaggctccttcaaagaagcagcaaaagaaaggcatagatttcaaaaaa
ataaagagaaagctaggccggaaattgcctccaccgaagaatgccacaaatactgaaatt
aaatccaaagcaattgtacttcctgagcagagtgtggcaacaaacaaggaaggtttagct
gtgagtaagaaaggattgactttgaaagaacttcttcagcaaacatctcatcataacgcc
aaagttcgaagggatgcattaatgggaatcaaggatttagtccttaatcatccggcagag
ttgaggctgcacagatatgcagttatagagaaactgcgggagcggataagtgatgatgat
aaagtagttagggaagcgttatatcaactgtttaagtctgaaattttccctggttgtgct
gaggataatcaaggacttctcatctccttattgatgacatatattttcaatgcaatgaca
aatttagcaattgacatccgcatgatggctttcaaattttttgatcttgttgtgcaatac
tatcctccttgcttttcattatatgctgagaagattcttcagagctatgaagatatttta
aggaaaaaccagtattatttagaagacaaggggaagctcagaactactctttcagggtta
gtccgctgcctgtcactgttgccaagcaaaaagccagaatctgaaaagggtatttcagga
gacaggatgatacatgcttttgagcctgatgcaccaacagcaaatactgggttctctacc
attatcaagaaactaaaggaccttgtgctagttctaataaactgtttccaagattttatt
ccattgctcatttctatgccacaactggatgcacaatcatttgattgtatattatccata
cttcaaagcatagatattgctgtaagattttttatttatggtactcatgaagtggcagct
gattcaatatgcaatcaaactctctcatcacccttgtcaaagaagttattgggagtattt
cccctttatccaaaacaccacctttctgtgaaggaggatgatagatattttatcctgaac
attgtcataacggagatatttttgcacctccgggaatggatctgcccttctgcaaatgtg
tttgagaaatttctcgagtttatagagaatgcactgctcggcacgatttgtagtagcaca
cgttctggtaaagtagcatgggaaaagcatgtaccttcattgcttcctttcattccgaaa
cttgcatcagaagtggaaactcgttggcagttacgcattcttgagtcatttactcagaca
ttcaagggttgcaatccagagtcttcacttaaattgtcttgcctgtccatgattgaagaa
atgttaattcctaatggagataagcactatactgaagcaagtgatactgtggtattagac
tttcagactgtttggataagagagctgccctcgttgttaatgcttcttggtgatagacaa
ccatcctcttctcaggttgtcttgcgccttcttcttcgtctcgggcaattttgcggttca
aactcttttcttttttgggactatgaaaatactcaatttgcactcagtgagttttacagc
acatgtgaagaaggaaacatatactatggtcctttcatgagacttcctagggattgtcag
gagttgtctatctgttgcctttattatttctctaacttgagtgcacttttgctgaaatca
gtagctttatgttgcctgtgtcctgaattggagctttttgtatctttccggattatagag
gttctgcatgctgcctacaaagctggacacatccaaattgctgatcatatcagcttcttc
atgactttactatctcgtttcaaagttttccctgaaaatatagatcctgttagagaaagt
gatgtaaaggtttcaaatcatggagcttttaagtctctcaccagcgtgctttgctcatac
ttgtcacagatgggtgatagttctgttgttttacaaatactagatcaagcaatcattggc
ttgatattgttgcaaccacctcttgacaatgcatgtgcaatgttgagagtgctcattctg
ctggactctaaacccactaggctttctgaacaaagtataattgctctaagcaatttcctt
ccaggatatcttatggatgttgtgcattgtattccagaagatgatgttcacacatggcgt
tattaccttctaccatgctttttcttgtttgataggagtaacaaggttctgaagcttgta
ttggatttaattggttcatttttaactgacagtaatttgtcgcttccatctgatacctct
acaagatatgccactgacaatctcagtcggataaatgcaactatttctctgctactatta
atgtacaaggacattaaagttcagaaaattatttctttattcagaacagaggtcagctca
attttgaaaagcatagcttctttacagtcttcagaagtcaagatgacccttgaagaaagg
cacagatttcaatgttcatttgaacaattaaaggtggttactagtacatcacctgctggc
tga
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