KEGG   Gossypium raimondii: 105800151
Entry
105800151         CDS       T04129                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105800151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105800151
Spliceosome [BR:gra03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105800151
 Complex B
    105800151
 Complex C
   U2 SnRNP specific factors
    105800151
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Vesi_VP2 Desulfoferrod_N EF-hand_15
Other DBs
NCBI-GeneID: 105800151
NCBI-ProteinID: XP_012486546
UniProt: A0A0D2S6M5
LinkDB
Position
9:44692470..44698839
AA seq 509 aa
MSSTLLEVTRAAHEDVERLERLIVKDLQNDPPTTKDGLYQSHRVRNNIDTIISTTEKLVE
IYEDKDNARKDEIAALGGQTATGVNVFSAFYDRLKEIREYHRKHPAARVVDANEEYEDLL
KEEPVIEFSGEEAFGRYLDLHELFNQYINSKFGAKIEYSAYLDVFSQPHNIPWKLKSTRQ
YREYMENLLEYLIYFFQRTEPLQDLDRIFSKLEAEFEEQWANGQVQGWEKQGQENEDDPA
QLTMIDLDYYSTVEELMEVGPEKLKEALAALGLKTGGTVQQRAERLLLTKHTPLEKLDKK
HFAKGSHGPRQNGSTAVSQDINSLKQIALVEAKMKKLCDLLSKTIEQTKENVVKKQALTY
EEMEQEREEEETQVDTESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITNIQEAQELWEKIRERQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcctcaactctactagaggtgactcgggctgctcacgaagatgtggaacggcttgag
cggctcatagtgaaggacttgcaaaatgatccacctaccacgaaagacggattgtatcaa
agccaccgcgtccgcaataatatcgacaccatcatctccaccacggagaagctagttgaa
atatatgaagataaagacaatgctaggaaagacgaaatcgctgctcttggaggtcaaacg
gctactggagttaatgtctttagtgctttttatgatagattgaaggagattcgtgagtac
catagaaaacacccagctgctcgtgttgtcgatgctaatgaagagtatgaggatttactt
aaggaagaaccagtcattgagttcagtggcgaggaagcctttggtcggtacctggacctg
cacgaattgttcaatcagtacattaattctaaatttggagccaaaattgaatactcggct
tacctcgatgtcttttcacagccacacaatatcccttggaaattgaagtcaacaaggcaa
tacagggagtacatggagaatcttctggagtatcttatttacttctttcagaggactgaa
ccactgcaagatcttgacagaatcttttctaagctcgaggctgagtttgaggagcagtgg
gctaatggccaggtacaaggatgggagaagcagggtcaagaaaatgaagatgatcctgcc
cagcttaccatgattgatcttgattattacagcacagttgaagagctgatggaagttggt
ccagaaaagttaaaggaggcattggcagccttaggactaaaaactggtggtactgtccag
cagcgggcagagaggcttttgctcaccaagcacacaccgctggaaaagctggacaagaaa
cattttgcaaaaggctcacatggacctcgacaaaatgggtctactgctgtttcacaagac
attaacagtctgaaacagattgcattagtggaggccaagatgaagaaactctgtgattta
ctgagtaagacaattgaacaaacaaaagaaaatgtagtaaagaagcaagcgttgacatat
gaggaaatggaacaagaacgggaggaggaagagacacaagttgacactgaaagtgatgat
gaagatcaacagatctataatcctcttaaattgccaatgggttgggatgggaagcctatc
ccttactggctttataaacttcatggtcttggtcaggagtttaagtgcgagatttgtggg
aactacagctactggggtcgtcgggccttcgagaggcatttcaaagaatggcggcatcaa
catggcatgcgatgccttggtatccctaacactaagaacttcaatgaaataaccaatatt
caggaagcacaagaactgtgggagaagataagagaacggcaaggagtgaacaagtggcgt
ccggatcttgaagaagaatatgaagataaagagggcaacatctataacaagaagacgtat
accgatctgcagcggcaaggactgatttaa

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