KEGG   Gossypium raimondii: 105804431
Entry
105804431         CDS       T04129                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105804431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105804431
Spliceosome [BR:gra03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105804431
 Complex B
    105804431
 Complex C
   U2 SnRNP specific factors
    105804431
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N Vesi_VP2 EF-hand_15
Other DBs
NCBI-GeneID: 105804431
NCBI-ProteinID: XP_012492510
UniProt: A0A0D2SK20
LinkDB
Position
11:17030176..17036535
AA seq 509 aa
MSSTLLEVTRAAHEDVEQLERLMVKDLQNDPPTAKDKLYQSHRVRNNIDTIISTTEKLIE
IYEDKDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPAARLVNVNEEDEALL
KEEPVIEFSGEEAFGRYLDLHELFNQYINSKFGSKIEYSAYLDVFSQPHNIPWKLKSTRQ
FREYMENLLEYLIYFFQRTEPLQDLDRIFSKVEAEFEEQWANGQVQGWEKQGQENEDDPA
QHTMIDLDYYSTVEELMEVGPEKLKEALASLGLKTGGTVQQRAERLFLTKHTPLEKLDKK
HFAKGSHGPRQNGSTAVSQDINSLKHIALMEAKMKKLSDLLSKTIEQTKENVVKKQALTY
EEMEQEREEEETQVDTESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITNIQEAQELWEKIRERQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactcgaggtgactcgggctgctcatgaagatgtggaacagcttgag
cggctcatggtgaaggacctgcaaaatgatccgcctactgccaaagataaattgtaccag
agccaccgcgtccgcaataatattgacaccatcatctccaccactgagaagctaattgag
atatacgaagataaagacaatgctaggaaagatgaaattgctgctcttggaggtcaaacg
gctactggaattaatgtctttagtgcattttatgatagattgaaggagattcgtgagtac
catagaaagcacccagctgctcgacttgtcaatgttaatgaagaggatgaggctttactt
aaggaagaaccagttattgagttcagtggcgaggaagcctttggtcggtacctggacctg
cacgaattgttcaatcagtacattaattctaaatttggatccaaaattgaatactcagct
tacctcgacgtcttttcacagccgcacaatatcccttggaaattgaagtcaacaaggcaa
ttcagggagtacatggagaatttgctggagtatcttatttacttctttcagaggactgaa
ccactgcaagatcttgacagaatcttttccaaggttgaggctgagtttgaggagcagtgg
gctaatggccaggtacaaggatgggaaaagcaaggtcaagaaaatgaagatgatcctgcg
caacataccatgattgaccttgattattacagtacagttgaagagcttatggaagtgggt
ccagaaaagttaaaggaggctttggcatcattaggactaaaaactggtggtactgtccag
cagcgtgcagagaggcttttcctaaccaagcacacccctctggaaaagctggacaaaaaa
cattttgcaaaaggctcacacggacctcgacaaaatgggtctactgcagtttcacaagac
attaacagtctgaaacatattgcattgatggaggccaagatgaagaaactctctgattta
ctgagtaagacaattgaacaaacaaaagaaaatgtggtaaagaagcaagcattgacgtat
gaggaaatggaacaagaacgtgaggaggaagagacacaagttgacacggaaagtgatgat
gaagatcaacagatctataatcctcttaaattgccaatgggttgggatggcaagcctata
ccttactggctttacaaacttcatggtcttggtcaggagtttaagtgtgagatttgtggg
aactacagctactggggccgtcgggcttttgagaggcatttcaaagaatggcggcatcag
catggcatgcgatgccttggtattcctaacaccaagaactttaatgaaatcaccaatatt
caggaagcacaagaattgtgggagaagatacgagaacggcaaggagtgaacaagtggcgt
ccagatcttgaagaagaatacgaagataaagagggcaacatttataacaagaagacgtat
accgatctgcagcggcagggactgatttaa

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