Garra rufa (doctor fish): 141283115
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Entry
141283115 CDS
T11039
Symbol
galca
Name
(RefSeq) galactocerebrosidase
KO
K01202
galactosylceramidase [EC:
3.2.1.46
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00600
Sphingolipid metabolism
grf01100
Metabolic pathways
grf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141283115 (galca)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141283115 (galca)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.46 galactosylceramidase
141283115 (galca)
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GFIT
Motif
Pfam:
Glyco_hydro_59
Glyco_hydro_59_C
Glyco_hydro_59M
YiaAB
Motif
Other DBs
NCBI-GeneID:
141283115
NCBI-ProteinID:
XP_073672492
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Position
13:complement(16514050..16521626)
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AA seq
660 aa
AA seq
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MHTDSLLIIIFCILGCSAEFYVIDDRIGLGREFDGIGGLSGGGATSRLLVNYEEPYRSQI
LDFLFKPNFGASLHILKVEIGGDAQTTDGTEPSHMHSKDEGSFFRGYEWWLMKEAKKRNP
NIKLIGLPWAFPGWIGDGTQWPYFFPNVTADYVVAWIRGAKQYHNLDIDYVGIWNEKEYD
PVYIKVLRDTLDRVGYTNIGIIVADGDWSIAAALLEDPYLNDAVEVIGVHYPGTKTVKEA
LFTQKKLWSSEDYSTFNDDVGAGCWARILNQNYVNGRMTSTISWNLIASYYENLSFGGDG
LMTADQPWSGHYVVESPIWMTAHTTQFTQPGWVYLQTVGNLTQGGSYVALTDREGNLTIV
IETMTHDHSQCIRPPLPHFDVFPQIAVFELKGSFAHLTDLEVWYSKLDFETKKDTLFQRS
SPIKVHNGLFALKLDVDEVYTITTVNTGRKGFYPEPPKSCPFPKNYSDDFTIDNPPFSEA
PYFADQTGVFEYFRNGTDNASHAFTLRQVVTERPVTWAKDADQTISIIGDYGWKDLDVSC
DVLIETPITGGVFLAARVDQGGESVRKAKGIFYWIYANGTYKVTNDIGGQRVVAEGQSGT
KEGVWYTLTLSVKGYFATGMLNGYLLWKNAVVLEPKNGWAALGTLSFEYAQFDNFKVNAE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagacagtctgctgatcataatcttctgcattctcgggtgctcagctgagttt
tatgttatagatgatcggattggattagggagagaattcgatggaataggtggattaagt
ggaggaggagccacttcacgacttcttgtcaactatgaagaaccgtacaggagtcagata
ctggatttcttgttcaagcctaactttggagcttcgctgcacatcctaaaagtagaaata
ggaggcgatgctcaaaccacagatggcacagaaccctctcacatgcacagtaaagatgaa
ggcagttttttccgtggatatgaatggtggcttatgaaagaagccaagaagagaaatcca
aacatcaagctgattggtcttccctgggcttttccgggatggattggagatggaacccaa
tggccttacttctttccaaatgttaccgctgactatgtagttgcatggatccgtggagca
aagcagtatcataaccttgacattgattacgttggaatttggaatgaaaaagaatatgat
ccagtatacattaaggtgctgagagatactttggacagagttggttatacaaatatcggc
atcatcgttgcagatggagactggtctatcgcagctgccttgctggaggatccatatctg
aatgatgctgttgaagtgataggtgtccactacccaggcaccaaaacagttaaggaagct
ctgtttacgcagaagaagctttggtcctctgaagattacagcaccttcaatgacgacgtc
ggtgccggatgctgggctcgtatcttaaaccagaactatgtgaatggcagaatgacctcg
actatatcctggaatttgatagcaagttactatgagaatctgtcttttggtggagatggg
ctgatgactgctgaccagccctggagtggacattatgtagtggaatctccaatatggatg
actgcacacactactcaatttacacagccaggctgggtttatctgcagactgtagggaat
ctcactcagggtggaagttatgtggctttaacagaccgtgaagggaacctcacaattgtt
attgaaaccatgacgcacgatcactctcaatgcattcgacctcctctaccacactttgac
gtcttccctcagatagctgtatttgagctgaaaggttcttttgcacatctcactgacctt
gaagtgtggtactcaaaattagattttgagaccaaaaaagatacactgtttcagcggagc
agtcctattaaggtccataatggtttattcgccttaaaactagatgttgatgaggtttac
acaatcacaactgtcaacactggacgaaaaggcttctacccagagccccccaaatcttgc
ccatttccaaagaattactctgatgacttcactatcgataaccctccattctccgaagcc
ccgtattttgcggatcaaaccggtgtgtttgaatacttcagaaatggcacagataatgcc
tcgcatgcctttactttgcggcaggtagtcactgaacggccggtcacctgggctaaagat
gccgaccagaccatcagcatcataggggactatggctggaaagacctcgatgtttcctgt
gacgtcctcattgaaactcccatcactggaggcgtgttcctggcggcgagggttgatcaa
ggtggagagtccgtcagaaaagcaaagggcatcttttattggatttatgcaaatggaacc
tacaaagtgacgaatgatataggtggacagagagttgttgctgaagggcagtcaggaaca
aaagaaggtgtatggtataccttaacccttagtgtcaagggatattttgccacggggatg
ttgaatggctatctgctgtggaagaacgctgttgtacttgaacccaagaatggctgggct
gcactaggaactctctcttttgaatatgcacagtttgataattttaaagtgaatgcagaa
taa
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