Garra rufa (doctor fish): 141283792
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Entry
141283792 CDS
T11039
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141283792 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Other domain-containing proteins
Patched domain-containing proteins
141283792 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
141283792
NCBI-ProteinID:
XP_073673206
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All DBs
Position
13:complement(32108831..32144513)
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AA seq
916 aa
AA seq
DB search
MCFIGRTGASSAASWIWRRMLRQVIHRGLKSSFYWLGLFVSRHPVFFLTVPAVLTIIFGS
TVLSRFKPETDLEILVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLA
KSGGNILELAEQVLQVHKKVLDMRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIR
LAVLSNSTFSKVPVSYPNTTLKDGRVSFIGHQLGGVALPANSRDQQVKFARAIQITYYLR
NLGPVVQDIISEKWESEFCKLVHQLATDSQELHIQSLTSFSLWRDFHKTGVLAKSEVLVS
LVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGIPFF
AMGHGTKGVFELLAGWRRTRESLPFKERVADAFADVMVCYTMTSSLYIITFGMGASPFTN
IESVKVFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDRQPT
WFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASFSFM
GCLQISDGSNIINLLASNSPSVSFALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEHLKT
LGQGFNKISWIDNYFHYLRVVNVSASTKSDFITMLKTSFLRSPEYQHFVDDIIFSKNGDE
YDIIASKMYLVARTTEKTREEVVELLERLRPLSLINSIKFIVFNPTFVFMDRYSSSIISP
ILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVDMDSISILCLIY
TLNFAMDHCAPHLYTFVLATEHTRTQCIKISLEEHGAAILQNTSCFVIGIMPLLFVPSNL
TYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKEREREREREREREE
IECIEVRENPDHVTNV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcataggaagaaccggggcatcatctgctgcaagctggatctggaggaggatg
ctgcggcaagtgatacacagagggctgaaatcttccttctactggctgggtttattcgtg
agcaggcatccggtgttcttcctcaccgtccccgcagtcctgaccatcattttcggatcc
acggtgctgagccggtttaagcccgagacggacctggagatcctggtcgccccgacgcac
agcctcgcgaagatcgagcggagtctcgccaacagcctcttccccatcgaccagtccaag
cacaagctgtactcggacctgcacacccccggcagatatggcagactcattctgctggcc
aaatccgggggaaacatcctggagctggccgagcaggtgctccaggtgcacaagaaggtc
ctggatatgcgtgtcaattacaaaggcttcaattacactttcgcgcatctctgtgtcctg
agccaccgggacaagagatgcctcctggatgatatcatcaccatattcgaagacattcgc
ttagctgttctgtctaacagcactttttccaaggtccccgtgagctatccgaatacaaca
ttaaaggatggtcgagtgtcctttattggccatcagctgggtggcgtggccttgccagca
aatagccgggaccaacaggtcaagtttgctcgcgccatccaaatcacctactacctccgc
aaccttgggccagtggtgcaggacatcatttctgagaagtgggagagtgaattctgtaag
ctggtgcaccagctggctacagacagccaggaactacatatccagtcgcttacgtccttc
agcttatggcgggacttccataagacaggcgtgctggccaagagcgaggtactggtcagc
ttggtgctggtgctcctggcagccaccatctccagctctatgcgggactgcttgcgcggg
aaacccttcctgggcctgttgggcgtccttaccatctgcatcgccaatgtgacggcagct
ggaatttttttcatctctgatgggaaatttaactctacactgcttgggatcccctttttt
gccatgggccatggaacaaagggtgtgtttgaactcctggcaggctggagaagaaccaga
gagagtttgcccttcaaggagagagtggcagatgctttcgccgacgtgatggtgtgctac
accatgaccagctcgctctatattatcaccttcggcatgggtgccagccctttcaccaac
atcgaatctgtgaaggttttctgccagagcatgtgtgtagcaatcctggtgaactacttc
tatgtattctcattctacggctcctgcttggtgttcgccgggcagctggagcaaaaccgc
tatcacagcgtcttctgctgcaagatcccgtcagtggagtatcttgaccgccagcccact
tggttcaagaccatgatgagtgacggccacgatttgtcaacgcaccacgacagcgtaccc
taccagaaccacttcattcagcacttcctgagggagcattacacagaatggattaccaac
acctacgtcaagccttttgtggttatcctctacctgatttacgcctccttttcattcatg
ggatgtttacaaatcagcgatggctccaacatcattaatctgctagctagtaattcgccc
agcgtgtcattcgccctgacccaacagaaatacttcagcaactacagtccggtgattggg
ttttacatctacgaacccattgagtattggaactccacagtacaggagcacctcaagacg
ctgggccagggctttaataagatttcatggatcgataattactttcactatctgagggtc
gtgaatgtcagtgcgtcaaccaaaagtgatttcattaccatgctcaagacttcatttctg
aggagcccagaatatcaacactttgtggacgacatcatcttctccaaaaacggagacgag
tatgacatcatcgcgtccaagatgtatttggtggccaggacgaccgaaaagaccagggag
gaggtcgtggagctgctagagagactaagaccgctctccctcataaacagcattaagttc
atagttttcaaccctacgttcgtgttcatggaccgctacagttcctccatcatctccccc
atcttaacgtcgggcttcagcgtgctcaccattctcatcctcaccttcttcctggtcatc
aacccactggggaacttctggttgatcttgaccgtcacctccgtggaactgggcgtcttg
ggtctcatgacgctctggaatgttgacatggacagcatctctatcctgtgccttatttat
actctcaactttgccatggatcactgtgccccccacctctacacgttcgtactggccact
gagcacacgcggactcagtgcatcaagatctctttagaggagcatggggccgccattttg
cagaacacctcgtgttttgtaattgggataatgcctcttctctttgtgccttctaacctg
acctacacactgttcaagtgctcccttctcacggccggctgcacagtgctgcactgtttc
gtcatcctaccggtgtttttgacatttttcccaccctctaagaagcggcacaagaaaaag
aaacgcgccaaacggaaagagcgggaaagggagagggagcgggagagggagagagaggaa
atcgagtgcatcgaagtcagggaaaacccagaccacgtgaccaatgtttga
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