Garra rufa (doctor fish): 141284781
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Entry
141284781 CDS
T11039
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141284781 (trpc4b)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141284781 (trpc4b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
141284781
NCBI-ProteinID:
XP_073673902
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Position
14:complement(13497254..13525996)
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AA seq
921 aa
AA seq
DB search
MSQLYYRRTDNSSYRDRIPLRIVRAESELSVQEKSYLSAVEKGDYASVKLALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKMLVQKGVSVPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKAE
YEELSHQCKRFAKDLLDQTRSSRELELILNFRDDINLLQDEGNNELARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLMFPLLSLCYLVAPKSLYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVSNNPDRQGPKPTTVEWMILPWVLGFIWTEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKYSGCKPRETWEMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YESNDGMNCKGIRCERQNNAFSTLFETLQSLFWSIFGLINLYVTNVQADHKFTEFVGATM
FGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPPFNII
PSPKSICYLITWIKVHVFKRRSKRTETFGTLGRRAAENVRLNHQYQEVLRNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRYEVIGMMKGNRNSIRVNKPGTAASDVSHPDGSLQ
YSSAYQQNKKLHLYDVTAVLQQQKPEDTRETLGCLVNGSAAVLTDPILKDKARKEFPKDF
TDFGLFSKKQNSLNPNKIYSLAEEAKESDSDILDWVREEKVKKSLAEKAEQEENESKCLM
EEEESVLEDQEKKHIASPHEH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttgtactaccgcagaacggataactcctcgtaccgggaccgcattccgctg
cggatagtgcgcgctgagtcggagctctcggtgcaggagaagtcctacctcagcgccgtg
gagaagggcgattacgccagcgtgaaactagcgctggaggaggcggagatctacttcaag
atcaacatcaattgcatcgatcctctagggcgcacggcgctgctcatcgccattgagaat
gagaacttggagatcattgaactgctcctcagcttcaacgtgtatgtcggtgatgctctg
ctccacgccattcgtaaagaggtggtgggagccgtggagctccttctgaaccacaagaag
cccagtggagaaaaacaggtaccacccatcctgctcgataaacagttctcagacttcacc
cctgacatcactcccatcatcctggctgcccacaccaacaactacgaaatcatcaagatg
ctggtgcaaaaaggtgtgtcggtccctcagcctcacgaggtccgctgtaactgcgtggag
tgtgtctccagttcggacgtggacagtctgcggcactcgcgctcccgtttgaacatctac
aaggctctggccagcccctctctcatcgccctgtccagcgaggatcctttcctcaccgcc
ttccagctcagctgggagctccaggagctcagcaaagttgaaaacgagttcaaggccgaa
tacgaggagctctcccatcagtgcaaacgctttgcgaaagatctcctggaccaaacccgt
tcctcacgtgaactggagttaatcctcaatttccgtgatgatattaacctgctgcaggat
gaaggcaacaatgagctggctcgactgaagttggccatcaaatatcggcaaaaagagttt
gtagcacagccaaattgccagcagctgttggcctcacgctggtatgatgaatttcctggc
tggaggagacgtcactgggctggcaagttcatcacctgcgtcttcatcggcctcatgttc
cccctgctctccctctgttacctggtggcacccaagagcctctacggcctcttcatccgc
aagcctttcatcaagtttatttgccacaccgcctcttatctgaccttcctctttctcctg
ctgcttgcctctcagcacatagtctctaacaatcctgatcgccaaggtccaaagcccacg
acagtcgaatggatgatcctaccatgggttctaggattcatatggacggagatcaagcag
atgtgggatggcggatttcaggattacatccatgactggtggaacctcatggactttgtg
atgaattctttgtatcttgcaaccatctcactgaagatcgttgcatatgttaagtacagt
ggttgcaaacccagggaaacctgggaaatgtggcaccccacactagtggccgaggcagtg
ttcgccatcgccaacatcttcagctctctacgcctcatctcgctcttcacggccaattct
catctaggtcctttgcagatatcattaggacggatgcttctggacatcctaaagttcctc
ttcatctactgcctggtgttgcttgcctttgctaatggactcaaccagctttacttctac
tatgagagtaatgatggcatgaactgcaaaggcatccgctgtgaacgtcaaaacaacgct
ttctcaacgctatttgagaccttgcagtctttgttttggtctatttttgggttgatcaac
ctgtatgtgaccaatgtccaagctgaccacaagttcaccgaatttgtgggtgccaccatg
tttggtacctataacatcatctccttggtggtcctcctcaacatgctcattgccatgatg
aacaattcctatcagcatattgctgaccatgctgatattgagtggaaatttgccagaact
aaattatggatgagttatttcgaggaaggaggcaccttgccacctcccttcaacattatc
cccagtcccaaatccatatgttacctgattacatggattaaggtccatgtgttcaagagg
aggtcaaagaggactgagacattcgggacattggggagaagagctgctgaaaacgtgaga
ctcaaccaccaataccaggaggtcttgagaaacttagtaaaacgatatgtggcagctatg
attcgagacgccaagactgaggaaggacttacggaggagaacttcaaagagctgaagcag
gacatatctagcttccgctatgaagtgattggaatgatgaaaggcaaccggaacagtatt
cgtgtgaacaagccgggcacagcagcctccgatgtttcccatccagatggttcacttcaa
tattcctcggcttatcagcagaacaaaaaactacatttgtacgatgtcactgcagtgcta
caacaacagaaacctgaagacacaagggagactcttggttgtctggtcaatggatcggca
gcagttttgactgacccgatactcaaagacaaagccaggaaagaatttcctaaggatttt
acagactttgggttattttcaaagaaacaaaacagtctcaatccaaataagatctactca
ctcgctgaagaagcaaaggaatcggattctgacatattagactgggtgagagaggaaaag
gttaagaaatctctggcagaaaaagctgaacaggaagaaaatgaatcaaagtgcctgatg
gaggaagaggaaagtgtgttggaggaccaagagaaaaagcacattgcatctccacatgaa
cattag
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