Garra rufa (doctor fish): 141288288
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Entry
141288288 CDS
T11039
Symbol
ndst1a
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
grf01100
Metabolic pathways
Module
grf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
141288288 (ndst1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141288288 (ndst1a)
Enzymes [BR:
grf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
141288288 (ndst1a)
Glycosyltransferases [BR:
grf01003
]
Unclassified
Sulfotransferases
141288288 (ndst1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
141288288
NCBI-ProteinID:
XP_073676508
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Position
16:10813604..10855515
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AA seq
874 aa
AA seq
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MLGVLRLRRLVRQVPLQTSFVFLFLLCILSVFLSSYFLYVVKRELEPSLASGRPADDLYV
TPSRPLPFLSGAGGALSSDGSRTDPVVLVFVESPYSQLGQEIVAILESARFRYRTEISPG
KGDMPTLMDGRRGRFVLIVYENILKYVNMDAWNRELLDRYCIEFGVGMIGFFKANENSLL
NAQLKGFPLFLRSNLGLKDCTVNPKSPLLHVTRARQVFRGPLPGDDWTVFQSNHSTYEPV
LLAKTRSAESTGLMHTSVVQDLGLHDGIQRVLFGHNLSFWLHKLVFVDALSFLTAKRLSL
SLDRFILVDIDDIFVGKEGTRMKVADVKALVETQNELRRSIPDFTFNLGFSGKFFHAGTE
EEDRGDDLLLSYVDEFWWFPHMWSHMQPHRFHNQSVLAEQMMLNRRFAEDHSIPTHLGYA
VAPHHSGVYPVHIQLYEAWKRVWDIRVTSTEEYPHLKPARFRRGFIHRGIRVLPRQTCGL
FTHTIFYKEYPGGPQELERIIDGGELFLTVLLNPISIFMTHLSNYGNDRLGLFTFKRLLN
FLLTWTHLKLQTLPPLQLADKYFQLFPSDAEPLWQDPCEDKRHEDIWSKEKTCDRFPKLL
LIGPQKTGATALYLFLGMHPDLSSNYPNKETFEEIQFFSGHNYQRGIDWYMEYFPLPSNS
SSDYYFEKSASYFDSDVAAVRAAALLPRAKIITVLSDPVDRAYAWYQHQRAHADPVALKH
SFHDVITASHNAPVKLRVLQNRCLAPGWYATHLSRWLEHYHHDQILVVDGQTLKTDPASV
MEKIQTFLGLENRVDYHKILAFDPKKGFWCQLLDGGKTKCLGKSKGQRYPDMDIQSQVFL
SNYYRDGNIQLSKLLYKMGQVLPGWLREDLLNIR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcgtgctccgcctgcgccgtcttgttcgccaggtgccgttacagaccagcttc
gtcttcctcttcctcctgtgcatcctcagtgtcttcctttcttcctacttcctgtatgtc
gtcaagcgagaactggaaccttcgctcgcatcaggacgtccggccgatgacctctacgtg
accccgtctaggcccctccccttcctgtctggagcgggcggggcactgtcgtcagatggc
tctcggacagatccggtcgtgctggtgtttgtggagagtccgtattcacagcttggacag
gagatcgtggctatcttggagtcagcgaggttccggtaccggactgaaatctctcccgga
aaaggagacatgcccacgttaatggacggacggcggggccgctttgtgctcatcgtgtac
gaaaacatcctgaagtatgtgaacatggacgcctggaacagggagttactggatagatac
tgtatcgagtttggagtgggaatgatcggcttctttaaggccaatgagaacagtctgctg
aatgcacagctgaaaggattccctctgttcctgcgctccaatctgggcctgaaggactgt
accgtcaaccccaaatcccctctgcttcacgtcacacgagcgcgacaggtgtttaggggt
cctctccctggggacgactggaccgtctttcagtccaatcactccacctacgagccggtt
ctgctggctaaaacccgttcagctgagagcactggactcatgcacacatccgtggttcag
gatctcgggcttcatgatgggattcagagggttttgttcggacacaacctctccttctgg
cttcacaagctggtgtttgtggacgctttatccttcctcaccgctaagagactgtcgctg
tcccttgaccgcttcatactggtggacatcgatgatatatttgtgggaaaggaagggacc
aggatgaaggtggcagatgtgaaggcattggttgaaactcagaatgagctacgcaggtcg
attccagatttcacctttaacctgggcttctcagggaagttctttcatgcaggtactgaa
gaggaggatcgtggtgatgatctgctgctgtcgtatgttgatgagttctggtggtttcct
cacatgtggagtcacatgcagccgcaccgcttccataaccagagtgtgttagcagagcag
atgatgctgaaccgacgcttcgctgaggatcactccatcccgactcatctgggttatgcg
gtggctcctcatcactccggtgtgtatcccgtccacatccagctgtacgaggcctggaag
cgtgtgtgggacattagagtgaccagcactgaggagtatccacaccttaaacctgctcga
ttcagacgtggattcattcaccgcggcatcagagttttgcccaggcagacgtgcggtctg
ttcacacacaccatcttttataaggagtatcctggcgggccgcaggagctggagcggatc
attgatggaggggagctgttcctcactgtcctgctcaaccctattagcatcttcatgacg
catctgtcaaactacgggaacgatcgtcttggtttgttcaccttcaaacggctgctcaac
ttcctgctcacctggactcacctgaaactacagacgcttcctccgctgcagctcgctgac
aaatacttccagctgttcccgtctgacgccgagccactctggcaggacccctgcgaggat
aaaagacacgaggacatttggtcgaaagagaaaacctgtgaccgtttcccaaaactgctg
cttattggccctcagaagacgggagcgacggctctctatctgtttctggggatgcatcct
gatctaagcagtaattaccccaataaagagacgtttgaggagattcagttcttcagtggt
cacaattatcagcgaggcattgactggtatatggaatatttccccctcccgtccaacagc
agctctgattattattttgagaaaagtgccagctattttgattcagatgtagccgcggtc
agagccgcagcgctgctgcccagagccaaaattattacagtcctgagtgaccctgtggac
cgagcctacgcctggtaccagcatcaaagagcgcatgctgaccctgtggctctgaaacat
tctttccatgatgtcattacggcatcccacaatgcacctgtgaagctgcgcgtcctgcag
aaccgttgtctggctccaggatggtacgccacacacctctcgcgctggcttgaacactac
caccatgaccagattctagttgtggacggtcagacattgaaaacggatccagcatcagtc
atggagaagatccagacgtttctgggtttggagaatcgagtcgattaccacaagatacta
gcgtttgacccaaagaaaggcttctggtgtcaactgctcgatggaggaaagaccaagtgt
ttaggaaagagtaaaggacagagatacccagacatggacatacaatctcaggtgtttttg
agcaactactacagagatggtaatatccagctctctaaactgctgtataaaatgggtcag
gttttgcccggctggctcagagaggatttgctcaacatcaggtaa
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