Garra rufa (doctor fish): 141290430
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Entry
141290430 CDS
T11039
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04814
Motor proteins
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141290430
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141290430
04820 Cytoskeleton in muscle cells
141290430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141290430
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
141290430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
TerB
SPEF2_C
EF_EFCAB10_C
EF-hand_EFHB_C
VPg
CDI_toxin_EC869_like
EF-hand_STIM1
Motif
Other DBs
NCBI-GeneID:
141290430
NCBI-ProteinID:
XP_073678649
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All DBs
Position
18:20327883..20339237
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AA seq
161 aa
AA seq
DB search
MPTDAQQDARSFLSEEMIAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRVFDKNQDGFIDREEFGDI
MRATGEPLSEEEVNELMADADTNKDGKLDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgatgcccagcaagatgcccgctctttcctgagtgaagaaatgattgctgag
ttcaaggctgccttcgacatgttcgacactgatggtggcggtgatatcagcaccaaggag
ttgggtaccgtcatgaggatgctgggtcagaatccaaccagagaggagctggatgccatc
attgaagaagtagatgaagatggcagtggcactattgactttgaggagttcttggtcatg
atggtgcagcagctaaaagaagaccaagctggcaagagtgaggaggaactctctgaatgc
ttccgtgtctttgacaaaaaccaagatggtttcattgaccgtgaggagtttggggatatc
atgcgtgcaactggtgagccattatcagaagaggaggtaaatgaactcatggcagatgcc
gacacaaacaaagatgggaagcttgattttgatgagtttctcaaaatgatggagaacgtc
cagtaa
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