Garra rufa (doctor fish): 141290431
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Entry
141290431 CDS
T11039
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04814
Motor proteins
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141290431
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141290431
04820 Cytoskeleton in muscle cells
141290431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141290431
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
141290431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
EH
AIF-1
SPARC_Ca_bdg
SAPC2_N
EF_EFCAB10_C
EF-hand_11
RTX_C
EF-hand_EFHB_C
DUF5580_M
SPEF2_C
EF-hand_13
CDI_toxin_EC869_like
SapB_1
Motif
Other DBs
NCBI-GeneID:
141290431
NCBI-ProteinID:
XP_073678650
LinkDB
All DBs
Position
18:20340592..20344031
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AA seq
160 aa
AA seq
DB search
MTDAQQEARSYLSEEMLAEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELEEII
EEVDEDGSGSIDFEEFLVMMVRLLKEDQAGKSEEELAECFRVLDKNGDGYIDRDEFAEII
RSTGESISEEEIDELLKDGDKNNDGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcaacaagaggcccgctcatacctgagcgaggagatgcttgccgagttc
aaggctgccttcgacatgttcgacaccgacggtggcggtgatatcagcaccaaggagttg
ggtaccgtcatgaggatgctaggtcagaatccaaccagagaggagttggaagaaatcatc
gaggaggtcgatgaagacggcagcggatccatcgactttgaggagttcttggtcatgatg
gtgagactccttaaggaggaccaggctggcaagtccgaggaagagttggccgaatgcttc
cgcgtgcttgacaagaacggtgatggctacatcgacagagatgagtttgctgagatcatc
cgcagcactggtgaatccatctcagaggaggaaatcgatgagctgcttaaagatggtgac
aaaaacaacgatggcatgctggactttgatgaattcctcaagatgatggagaacgtgcag
taa
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integrated database retrieval system
