Garra rufa (doctor fish): 141292454
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Entry
141292454 CDS
T11039
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141292454 (siah2l)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141292454 (siah2l)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
141292454 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
141292454
NCBI-ProteinID:
XP_073680571
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All DBs
Position
19:5599620..5649108
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AA seq
332 aa
AA seq
DB search
MSRPSSAGGAAGGLGAGKAGGSKHGGSGGATASAAAAAAAAAAAAAAAAAAAAGVSGSVA
GSGTVPAAAVALPAAALPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSC
CPTCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTCPC
PGASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFM
LVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAA
IMNSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctgcgggtggtgcggccggaggactcggagctggtaaagcagga
ggaagtaagcatggaggttctggaggagctaccgcctctgctgccgccgccgccgccgct
gcagctgctgccgctgcggccgcagcagcagccgccgcgggggtatccggctctgtcgcg
ggctcgggtacggtgcccgcggccgctgtagcccttccagccgctgccctgccgggacag
tcagccgaactgacagcgctgtttgagtgcccggtgtgtttcgactatgtgctgcctccg
atcttgcagtgccaggctgggcatctggtgtgtaaccagtgtcggcaaaagctcagctgt
tgtccaacttgtcgcggccctctcacgccgagcataagaaacttggcaatggaaaaagtt
gcatctactttgccgtttccgtgtaagtatgcctcagctggatgtctgctgtccctccac
cacagcgagaagccggagcacgaagaagtctgtgagtttcgcccatacacctgcccatgc
ccgggggcttcctgtaaatggcagggctccctggaagccgtcatgccacatctcatgcat
gcccacaaatccattaccaccttacagggtgaggacattgtctttctggccacggatatt
aatctaccgggggctgtggactgggtcatgatgcagtcttgtttcggccaccacttcatg
ctggttctagagaagcaggagaaatacgaaggacaccagcagttctttgccatcgtgttg
cttattggcacacgaaagcaagcagagaactttgcctatcgtctcgagttgaacggcaac
cgcaggcggctcacatgggaggccacgccgcgctcaatccacgatggcgtagcggcagcc
atcatgaacagtgactgtcttgtatttgatacctctattgcccacctgtttgcagacaac
ggcaacctgggtatcaacgtaaccatctccatgtgctga
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