Garra rufa (doctor fish): 141293315
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Entry
141293315 CDS
T11039
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141293315
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
141293315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
141293315
NCBI-ProteinID:
XP_073681437
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All DBs
Position
20:complement(7519225..7524888)
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AA seq
931 aa
AA seq
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MTIAEPWDQRISAFLLSPSQFLATTTSESFLAEVLHELRNDKANDHLKILLVSVLLEHPT
ILCTSSSEGEETALELLSVFSHTPQKSIILKCSVMLAITNVIICTSCLATHTKTAEDWLD
LLFQTIQDTNDYRCGLSQQPLRATACDCLREMEICNPGLLSQKLEALYLLKQQETTVLHQ
SYCMLYTLGLKNAIKILAKQKDITDLEFKSILGGNEGFAWKSNQLGLTALPINMMVQVPC
LPPGLDCKELKSIMSSLLEESYLLTPISQSALLRELVEVVAMVPGLSPTLFKSQLLRLFG
TAEASLMHATLFMKDTFTDSLFTAEDENFLLKRLVGTAQHPLLRIPEKLFYMECILHFPE
NRPISSSGEESLPVLVTPRLAASLHPTVFNDSATMLCRLNLLCLVHLEADEGEADKGIDY
LFDHIMALLKIVDNEGTREVVVTSFRALFIFLMHFNGVEELSEKLIEKLCDMYSRHSRLA
PNLIGLADRIQEHLDDPVWSVRLLRGLQKCIMEMPPLQLTIHNLGWHLKVLKRVAKEGQI
TQKNTIYLLLNVLINSNLCERGNWQVGNAVLAVCRNLLEHPSIDQVFIELADLLQYISVH
YDDTDIKDHARFYYTLLTNLSWEKLTGVLVKGLDGGRAKERSHSAIMAESEGIASNLTVH
KTNRHVLQLIKVHDKALPESSESLQTTKEAENWLEVYQSQFQTPGFASEVTLRYNLTHAK
ESDALFDKVFTICLHFELKDSNYAKVNDIHVPCVFKDRKPPEVKVKLKPFQPYPTTLCIS
AIFTTQDGRSWHSQLPDVSVSFSEIFLPLPLPPNTSCESKEQVFDHIWEDVASGNPDKSA
ISLFCFKTGDESLATLIETHFQGYLITDQPIERSWKVLFFLPPMCHVLLKITQAEDAVQV
SVATDNWELLPFVNSYLQNINDHCGTTVTDG
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcggaaccctgggatcagagaatatctgcctttctgctgagtccatctcag
tttttggccaccaccacatctgagagcttcttggctgaagttctacacgaactgcgtaat
gataaggccaatgatcatctcaagatcctccttgtgtcagtgcttctggagcatccgacc
attctctgcacgtcatcctctgagggtgaagaaaccgcccttgaactgctgtcagtcttt
tctcacacaccacagaaatccatcatcctcaagtgcagtgtcatgctggccatcaccaac
gtgataatatgcacatcctgcctggctacccacacaaagacagctgaagactggctggac
ctgctgtttcaaacaatccaggacaccaatgactacagatgtggcctctcccaacaacca
ttaagagccactgcttgtgattgcctacgagaaatggaaatctgtaatccaggtttgctt
tctcaaaagctagaggccttatatcttctaaaacagcaagaaaccacagttctgcatcag
tcctactgtatgctttacacactcgggctgaagaatgccattaaaatcttggcgaagcaa
aaggacatcactgatttagagttcaaaagcattttaggaggaaatgaggggtttgcgtgg
aaatccaatcagttgggattgaccgcattgccaataaacatgatggtccaagtcccatgt
ctgccaccaggattggattgtaaagaactcaaatcaataatgtcatccctcctggaggag
tcctatttgcttacgcctatttctcagtctgctttacttagggagctcgtagaagttgtc
gcaatggttccgggactctctccaacgttattcaaatcgcagcttctgcgactttttgga
acggcggaggcatctctaatgcatgctacgctctttatgaaggacactttcacagatagc
ctcttcaccgccgaggacgagaacttcctgctcaagcgtctcgtgggcacagcccaacat
ccgctcctaagaattcccgaaaagctcttctacatggaatgcatcctccacttccctgag
aaccgacccatatccagcagcggagaagaaagtttacccgtgctggttacaccacgtctg
gcagcgtctctccatccaacggttttcaatgatagtgctactatgctctgcaggctgaac
cttctttgtctggtgcatcttgaagcagacgagggcgaagcagataaaggaatcgactac
cttttcgatcacataatggctcttttaaaaatcgtggacaatgaaggtaccagagaagtg
gtggtgacctctttcagagcgttgtttatttttctaatgcactttaacggcgttgaagaa
ctctccgagaagctgattgagaaattatgcgacatgtattccagacattcacgactcgct
cccaatttgattggcctggcggatcgcattcaggagcatctggatgacccagtttggtcg
gtcaggttgttgagaggccttcaaaaatgcataatggaaatgcctccattgcagttgacg
attcacaatttgggttggcacctcaaagtcttgaaaagagtagctaaggaagggcagatc
acccagaagaacaccatttaccttcttctcaatgttctcatcaactccaacttgtgtgaa
cgaggcaactggcaagttggaaacgctgttcttgctgtttgtcgcaatcttttggagcac
ccatccatcgatcaggtgtttatcgagttggctgatcttttgcaatacatatcggtgcat
tatgatgacacggatattaaggatcatgctcgtttctactacacactgctcactaacctt
tcatgggaaaagctgacaggggttcttgttaaagggcttgacggaggacgtgccaaagaa
cggtcgcattcggcgattatggccgagagcgaggggattgctagtaacctgaccgtgcac
aaaaccaaccggcatgttttacaactcatcaaggtgcatgataaagccttgccagaaagt
tcagagtcattgcagacaacgaaagaagctgagaattggttggaggtttatcaaagtcag
tttcagactcctggatttgcctctgaggtgaccttgaggtacaatctgactcatgcgaaa
gaatccgatgctttattcgataaagtcttcacaatctgtctgcactttgagctgaaagac
tcaaactatgcaaaggtaaatgacatacacgtaccatgtgtgttcaaagacagaaagcca
cctgaggtcaaagtcaagctcaagccttttcaaccctaccctacaactttatgcatcagt
gccatatttaccactcaagatggacgttcttggcacagccaactgcctgatgtgagtgtt
tcattctctgagatattccttcctcttcctttaccaccaaacacatcctgtgaaagcaaa
gagcaagtgtttgaccacatctgggaggatgtggcctctggaaatcccgacaaatctgct
attagtctgttctgtttcaaaactggagatgaaagtcttgctactctgatcgagacacat
tttcagggttaccttattacggatcagccgattgaaagatcgtggaaagtcttgttcttt
cttccacctatgtgccatgtccttttgaagattacgcaggctgaagatgccgttcaggtc
agcgttgcaacggacaactgggagctgttaccctttgtgaactcctatcttcaaaacatt
aatgatcattgtggcacaactgtaacagatggctaa
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