Garra rufa (doctor fish): 141293910
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Entry
141293910 CDS
T11039
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141293910 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141293910 (slc6a11b)
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141293910 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141293910
NCBI-ProteinID:
XP_073682083
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Position
20:complement(30473098..30512652)
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AA seq
617 aa
AA seq
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MTAEKTIPIINGKADDTMDPEAATPSAVRSNDKKVVNERGQWNNKVEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASCGHYWNTENCVDFNNESIANL
TNPYATSPVIEFWERRVLRISSGIEEVGSLRWELALCLLIAWVICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAIVDMYPKTFRVGY
RRELLILGMSVVSFLVGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWIYGGD
RFYSNIEDMIGYKPIFFIKWCWKYFTPGICSGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WMMAMSSMVCIPLGILFQIWKTEGTFRERIKKLTTPSADLRMRGRLSSRGPCAINDADAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgattcccataataaatggaaaagcagacgatacgatggaccca
gaagcggcgaccccgagcgcagtgcgcagcaatgataagaaggtggtgaacgagagagga
cagtggaataataaggttgagtttgtgctgtcagtggctggagagattatcggccttggc
aacgtttggaggttcccatatctgtgttacaagaacggcggaggtgctttcttcgtgcct
tatgtcatcttctttgtctgctgtgggattcccgtcttcttcctggaaacagcgctaggt
cagttcactagtgaaggaggcatcacatgttggcgaaaagtctgcccgctctttgaaggc
attggctatgcgacccaagttatcgaagcccacctgaatgtttattatgtggttatattg
gcttgggccattttctacctgttcaactgctttacaacagagctaccctgggcatcatgt
ggtcactactggaacacagaaaactgtgtggattttaacaatgaaagcattgccaacctc
accaacccatatgccacatcaccagtcatagagttttgggaacgccgtgttctccgcata
tcctctggaattgaagaagttggcagccttcgctgggaacttgctctctgtctacttata
gcctgggtcatatgttatttctgcatttggaaaggtcccaaatcaactggaaaggtggtg
tatgtcactgcaacctttccttatttcatgctgttgatcctccttcttcgaggaatcacg
ctgccaggagctgctaatggaattaaattctacctgtaccctgacatctcacgtctgtca
gaccctcaggtgtgggtggacgcaggcactcagatcttcttctcatatgctatatgtctg
ggctgtcttacggctctcggcagctacaacagctacaacaacaactgctacagggactgc
atcatgctgtgctgtctgaacagtggcacgagttttgtggcaggatttgccattttctct
gtcttgggcttcatggcatatgagcaaaatgtgccgatagaggcagtggcagaatcaggt
cctggtctagcgttcatagcatatcctaaagctgtgaccatgatgccgtggtctccactg
tgggcctgtctgttcttcatgatgctcatcttcctcggactcgacagtcagtttgtttgt
gtggagagtcttgtgactgcaatcgtggacatgtatcccaaaaccttccgcgtgggttat
cggcgggagcttctcatcctgggaatgtctgtggtctcgttccttgtgggtctaataatg
ttgacagagggtggcatgtacgtgttccagctctttgactcgtatgctgccagtggcatg
tgtctgttgtttgtggccatctttgagtccatctgcattggctggatctatggtggcgac
aggttttattcgaacattgaggacatgattggatacaagcccatcttcttcatcaaatgg
tgctggaagtacttcaccccaggcatctgttctggcatcttcctgttcttcttgattaag
tacaagccgctgaagtataataatgtgtacacttatccagactggggttatggcattggc
tggatgatggccatgtcctctatggtttgcatccctctgggaatcttatttcagatctgg
aagacggaaggaactttccgtgagaggatcaaaaagctgaccacacccagcgctgacctg
agaatgaggggacgtctcagctccaggggtccctgcgctatcaatgatgctgatgccaaa
atgagagcggatggcaagatctccaccatcacagagaaggagacgcatttctaa
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