KEGG   Garra rufa (doctor fish): 141299065
Entry
141299065         CDS       T11039                                 
Symbol
kdm6bb
Name
(RefSeq) lysine (K)-specific demethylase 6B, b
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:grf03036]
    141299065 (kdm6bb)
Enzymes [BR:grf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     141299065 (kdm6bb)
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    141299065 (kdm6bb)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 141299065
NCBI-ProteinID: XP_073685440
LinkDB
Position
23:complement(22641942..22688381)
AA seq 1694 aa
MYHIAEQYSGRNSWDSFPSSGPNRAPWAPGSNRHWAPPSRCSGGNYQSPSQNYTAGRSYP
NKAYNNRPPGFSRDRPHTHPRDRGIGKEQRVPRVCGPTQSQHHNPERPTLNYSSGCGGHL
SSSNNHSSQPHRYGGLHQQQRSTVRPPQTQGEKWTQSQSRTFQGPSLKRPVPPQNMSPPL
RDPSPPRDDCPSKRSRSNSSHQNFHLREKYLINRPPPSHPPRPWSPGYKSSMPWSLSEKR
SSPSCFQESSHSVMRDHTYRPYSLPSPPSSAPSQGVHSKKPTKQGQPHHPVRDHPGPHPR
GAKGGWDCPSPANLTSVPYSQQHQLPPPQRHTGPSSSPATSVPQPRFNTAHPGWKTQSRS
GKHGSSETGRTTSGLESQESVGGDRKRASASKHISRQRSPIQPYSSAEGRVTDCSEWRSP
ETGSKKHNQRDSDSPSEPITQTLDRGQRAQKSEMKKSRHSKHQTGSKPTHKSSLSKLDTE
LLKHIQAKRRQKERLRRKEKKKEGELLDTRERMEKKMEDRKKKKIKDGRKGHDKKNIHQN
GRKLGQISRRAKEERKKETHEDRKSEPSSKSASPSLGTLYLSDSEPLLDDLLSEPLDLNH
REEESSQHTSGFILPSVNNNQSTHKANTKALEVDDQSDSSEPDHVDTSDDDSVEDHDVGR
SKLILLDKQKVCNEEPIGSKEGVLGLHTAPDLLPAHCTYSEELLRLDPPTSPPVLSWQGS
PVSDLGEDEEGKEGDLIRVLRRPVLQPSPTHSSPLRDQVEINTGVDYCHSDLAKLYGLPE
SSKAMVTEEEDEEKREGEQKDSSPDVSSSSEPNKPHLHQMDTFKSTTSAMGSHRYTYRGG
PFGRPPPGALIGVKYSSSLSLGPEINPPDQHSPPATSPTTEIPDQVTSPLIEPAEKDKES
KTEEERMETNAKEDEIEEEKEETEVQKTDEQDEIKVAESAEDPTCTSLEEKEPLMSPATL
QAKLVQSCELLLNQNSSPVTKEMKVSGSTSTEKEQEHDQARKKDQVRSPRKAGRGKKGED
PEKTNGGKDKKDMVKDETETKASSSEGLDEHLVEIKNEQVVPENQKLDLKDGDKESKEIQ
RVKETDVKKETIKEDPVKAGTSATTNTQTSVTVTPSSRSLLLERVNLLNLQELSKIPLKE
LKIRLVKVESGGRQTFIASEIEQKTMPLNAINIKNSAAEVVQACKGANIKSKFRESYLLP
ALSVKPDLTTEIPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNAVTVIRGLAGSL
RLNLGLFSTKSLVEANSEHAVEVRTQVQQPADENWNHSGSAQTWPCESSRSHTTIAKYAQ
YQASSFQESLQEEKDSEDEDEDDKSEEKTVKKSNSQGNTATSTTTSSSEQKAIGKIIKFG
TNIDLSDPKRWKLQLQELLKLPAFMRVSSSANMLSHVGHTILGMNTVQLYMKVPGSRTPG
HQENNNFCSVNINIGPGDCEWFAVHEHYWKAISDICEKHGVDYLTGSWWPVLEDLYRANI
PVYRFIQRPGDLVWINAGTVHWVQAVGWCNNIAWNVGPLNGYQYQLALERFEWNEIKKVK
SIVPMIHVSWNVARTIKITDPNTFKMIKHCLLQSIKHIQILRDQLVSAGKKISYQSRVKD
EPAYYCNECDVEVFNLLFVTSESSSRKSYVVHCEDCAREQSPGLSGVVVLEQYRINELMN
TYDNFTLAPVPCCR
NT seq 5085 nt   +upstreamnt  +downstreamnt
atgtatcacatagcagagcagtattctggacgtaactcgtgggactccttcccctcttct
gggccgaatcgagcaccatgggccccaggcagcaaccggcactgggcccctccatccagg
tgcagtggagggaactatcaatccccatcccaaaactacacagcaggaagaagctaccca
aataaagcttataacaacaggcctccaggtttcagcagagacaggccccacacgcacccc
agagacagaggtatcggaaaagagcagagggtccccagggtctgcggaccaacacagagc
cagcaccacaacccagaacgccccaccctaaactatagctcagggtgtggagggcatctc
tctagcagcaacaatcacagcagccagccacacagatatgggggtttacatcagcagcag
cgttccactgtgcgtcctccacaaacccagggagagaaatggacacagtctcagtccagg
acattccaagggccctctcttaaacgtccagttcctcctcaaaatatgtcaccaccactc
cgggacccatcccctccacgagacgactgtcccagcaagaggagcaggagcaacagctca
catcagaatttccacctgagagagaaatatttaatcaaccgtccacccccatcacatcca
cctcggccatggagcccaggatacaaaagctcaatgccctggagcctgtctgagaagagg
tcctccccctcatgctttcaggagtccagtcattcagtcatgagagatcacacctacaga
ccatattccctcccatcaccacccagcagtgccccaagccagggcgtccacagcaagaaa
cccaccaaacaggggcaacctcatcatccggtccgagatcatccaggcccccatccccgt
ggggccaaagggggctgggattgcccatcaccagcaaacctcaccagtgtgccttacagt
cagcagcaccagctccctccaccacagaggcacaccggcccttccagcagcccagccacc
tcagtacctcaacccagattcaacacagcacaccctggctggaaaacccagagccgttcg
ggaaaacatggcagcagtgagacagggcgtaccacctctggcctggaatctcaagagtct
gtgggtggggaccgaaaacgggcaagcgcatctaaacatattagccgccaacgaagtcct
atccagccatacagcagtgcagagggtagagtcacagattgttcagaatggaggagccca
gagactgggtcaaagaaacacaatcagagagactcagactccccttctgagcccatcact
caaaccttagacagaggtcagagggcacaaaagtccgaaatgaagaagagcaggcactct
aaacaccagactggatccaaacccacccacaagagctccctcagcaagctggacaccgaa
ctcttgaaacacattcaggccaagaggaggcaaaaggagcgtttaagaaggaaggagaaa
aagaaggaaggagagctgttagatacaagagaacggatggagaaaaaaatggaggacagg
aaaaagaaaaagataaaggatggaagaaagggacatgataagaagaacatacatcaaaat
ggccgaaagttgggacagatatcaagaagagcaaaggaggagagaaaaaaagaaacgcat
gaagacaggaagagtgagccctcttcgaaatcagcatcccctagtttaggaacattgtat
cttagtgattctgaacctcttctggatgacctactatctgagccacttgatctcaatcac
agagaggaagagtcctctcaacatacctcagggttcatcctaccttctgttaataataac
caatcaacccataaagccaatactaaagccttagaggttgacgaccaatcagactcttct
gagcctgaccatgtagacactagcgatgatgacagtgtagaggaccatgatgttggcagg
tccaaacttattcttcttgataagcagaaggtttgtaatgaagaacccatcggaagcaag
gagggtgttttagggttgcatactgccccagacctcctcccggctcactgcacctatagc
gaggagctcctaaggctggacccaccaacaagcccaccagttctgagctggcagggctct
ccagtgtcagacttaggtgaagatgaggaagggaaagagggagatttgattagagttctg
aggaggccagtgctacaacccagtccaacacattcatctccactaagagatcaagtggag
atcaacactggagtcgactattgccatagtgacctggccaagttgtacggtcttcctgag
tcctccaaagcaatggtaactgaggaagaagatgaagaaaagagagagggtgagcagaaa
gatagtagtcctgatgtatcaagcagctcagagcccaacaaaccgcacttgcaccaaatg
gacacattcaaatcaacaacatcagcgatgggcagccatagatacacttacaggggtggg
ccatttggtcggccacctcctggtgctttaattggggtaaaatactcatcatctttgtcc
ttgggtcctgagatcaaccctccagatcagcatagtccacctgccacatctccaactacg
gaaatcccagatcaggtcacatcaccactgatcgagcctgcagagaaggacaaagagagt
aaaacagaggaagaaagaatggaaaccaatgcaaaagaggatgaaattgaagaagaaaag
gaggaaactgaggtgcagaaaacagatgaacaagatgagatcaaagtagctgaatcagct
gaagacccaacctgcacttcactggaggagaaggaacctctaatgtctcctgctaccctg
caggctaaactagtacaaagctgtgagctactgctcaatcaaaactccagccctgtgaca
aaggaaatgaaagtcagtgggtccacatctactgagaaagaacaggaacatgaccaagct
agaaagaaagatcaagtgaggtctccaagaaaagctggtagaggcaagaaaggagaagat
cccgaaaagactaatggaggaaaggataaaaaggacatggtgaaggatgaaacagaaaca
aaagcttcatcctctgaaggtttagatgagcacttggtggaaatcaagaacgaacaggtt
gtcccagaaaaccaaaaactcgacttgaaagatggagataaagaatctaaagaaattcag
agagtaaaagagacagatgttaaaaaagaaaccataaaagaagacccagtaaaggctggt
acatctgccacaaccaacacgcaaacctcagttactgtgacaccctcaagtagatctctg
ctgctggaacgggtcaatctccttaatctccaggagttgtctaaaattcctttgaaagaa
ctgaagatccgtttggtcaaggttgagagcggaggtcggcagactttcattgcctcagag
atcgagcagaagaccatgccactcaatgccatcaacatcaaaaatagcgcagctgaggtt
gtacaagcctgcaaaggggcaaacatcaagagcaagtttcgggagtcgtacctgcttcca
gcgctttcagtgaaacctgacctgaccaccgagattcctattcccagagagaaattgaac
cctccaacaccgagcatttatctagagagtaaaagagatgctttttctccggtactgctg
cagttctgcacagaccctaaaaatgctgttactgtcatcagaggactggctggatccctc
cgtctcaatctgggtctgttctccactaaatccctggtagaggccaactctgagcatgcg
gtggaggtgaggactcaggtgcagcagccggcagacgagaactggaaccattcaggatcc
gcccagacctggccctgtgaaagcagcagatctcacaccaccattgctaaatatgcacag
taccaagcgtccagtttccaggagagcttacaggaagagaaagacagtgaagatgaagat
gaagatgacaaatcagaggaaaaaactgtgaaaaaatccaactcccaaggaaacactgcg
acttctaccaccacatccagctcagagcagaaagccattggaaaaatcatcaaatttgga
accaacattgacttatcagaccccaaacggtggaagctacagctgcaggagctgttgaag
ttgcctgcgtttatgcgcgtttcctccagcgcgaacatgctgagtcacgttggccacact
atactgggcatgaacacagtccagctttatatgaaggtcccaggcagccgcacaccagga
catcaggaaaataataacttctgttcagtgaacatcaacattggccctggagactgtgag
tggtttgccgtccatgaacactactggaaagccatcagcgacatatgcgaaaagcacggc
gtggactatctaacaggctcgtggtggccggttctggaggatctgtaccgcgcaaacatc
ccagtgtaccgcttcattcagagacccggagacctggtgtggatcaacgctggcactgtg
cactgggtgcaggccgtgggctggtgcaacaacattgcctggaacgtgggccctttaaat
ggctatcaatatcagctggctcttgaacgctttgagtggaacgagatcaagaaagtaaaa
tcgatcgtccccatgattcacgtgtcctggaacgtcgcccgcacaatcaagatcacagac
ccaaacacattcaagatgatcaaacattgtcttctccagtcaatcaaacacattcagatt
ttaagggaccagctggtgtctgcggggaagaagatctcctatcagagcagggtgaaggat
gagccagcatactactgcaatgagtgtgatgtggaggtgtttaacctgctgtttgtgacc
agtgagagcagcagtaggaagtcgtatgtggttcactgtgaggactgcgctcgggagcag
agcccaggtctgagcggggtggtggtgctggagcagtaccgcatcaatgagctcatgaac
acatatgataacttcactctggctccagtcccgtgctgtaggtga

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