Garra rufa (doctor fish): 141299192
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Entry
141299192 CDS
T11039
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141299192 (trpc4a)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141299192 (trpc4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
BAR_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
141299192
NCBI-ProteinID:
XP_073685597
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Position
23:complement(20119117..20136323)
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AA seq
915 aa
AA seq
DB search
MSQLYFRRKDNFSYSDRIPLRIVRAEPELSPLEKAYLCAVEKGDYASVKQALIEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDVTPIILAAHTNNYEIIKMLVQKGVSMPQPHQVRCNCME
CVSSSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQELSQVENEFKSE
YEELSQQCKHFAKDLLDQTRSSRELELILNYRDDMNLLEDEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFSGWRRRHWASKFITCMFIGFLFPFFSLLYLIAPKSHHGLFIR
KPFIKFICHTASYLTFLFLLLLASQHVERVDNEERIKKDPVLTKQGPEPTNVEWMILPWV
LGFVWAEIKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVTYFMYFDTYGQWAEWE
MWHPALVGEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLA
FANGLNQLYFYYETKGREIDNKICKGIRCSEQNNAFTTMFETLQSLFWSIFGLVALHVTN
VDADHEFTEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMS
YFEEGGTLPPPFNIIPSPKSVWYLIRWIKAHCFNVKHRKRTETFGSLGMRAAENVRTNRQ
YQEVLRNLVKRYVAAMIRDAKKEEGLTEENFKELKQDISSFRYEVMGMVKGTKIGVSNSK
GCTGASNLYPDNSMKCNSTSAGSQLKGKMRLQSVATSVIQEGGPKANAWMSGLAKNTVSN
QMNCKGPNNPGEIYSVSEEAGESESEEQDDGEQRGNENQNNETEKDGLNETSEEDEEMTY
MRYMCEEEMKEESRL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactttcggagaaaggacaacttctcgtacagtgaccggatccctttg
cgaatagttcgagccgagcctgagctgtcgccgctggaaaaggcctacctgtgcgctgtg
gaaaaaggcgactacgccagtgtcaaacaagcgctgatagaagccgagatctacttcaaa
atcaacatcaactgcatcgaccctctgggacggacggctctgttgattgccatcgagaat
gagaacctggaaatcattgagttgctgctcagctttaacgtgtacgtgggggatgcgctt
ttacacgccatacggaaggaagtggtgggggctgtggagctgcttctgaatcataaaaag
cccagcggaggcatgcaggtgcctcctatcctgttggataaacagttctccgactttacc
cctgacgtaacacctatcatcttggccgcccacaccaacaactatgagatcatcaagatg
ctggttcagaaaggtgtgtccatgccccagccccaccaggtgcgctgcaactgcatggaa
tgcgtgtccagctcagacgtggacagtctgcgacattcccgatcccgtctcaacatctac
cgtgccctggccagtccctcactcatcgccctgtccagcgaagaccccttcctgacagcc
ttccagctgagctgggagctccaagagctcagccaggtggagaacgaattcaagtccgag
tatgaagagctttcccaacagtgcaagcacttcgccaaagatctgctcgaccaaacacgc
agctccagagagctcgaactgattctcaactacagggatgacatgaatcttttggaggat
gaagggaataatgatctcgccaggttaaaactagctatcaagtaccaccagaaagagttt
gtagcacagccaaactgtcagcagctgctcgcatctcgctggtacgatgagttctcaggc
tggagacgccgccactgggccagcaagttcatcacctgtatgttcatcggattcctcttc
cctttcttttcgctgctctacctgatcgctcccaagagccatcacggcctcttcatccgg
aaacccttcatcaagtttatatgccacactgcttcttatctgaccttcctctttctcctg
ctgttggcctcccaacacgtggaacgtgtggataatgaagaacgcatcaagaaggatcca
gtgctcaccaagcaaggtccagagcctaccaatgtggaatggatgatcctaccctgggtt
ttaggatttgtatgggctgagatcaaacaaatgtgggacggtggctttcaggattacatt
cacgactggtggaacctcatggactttgtcatgaattctctgtatctggccaccatctca
ttgaaattcgtcacttactttatgtactttgacacctacgggcagtgggcggaatgggaa
atgtggcaccccgccttggtgggcgaagccttgttcgccattgctaacatatttagctcc
ctacgtctgatttcactcttcacagccaactcccacctgggccctcttcagatctctctc
ggccgaatgctgctggacatcctcaaattcctcttcatttactgcctggtgctactcgca
tttgcgaatggactcaaccaactgtatttctattatgaaactaaaggcagagagattgac
aataaaatatgcaagggcatccgctgctcagagcagaacaatgcattcaccaccatgttc
gagaccctgcagtcattgttctggtccatatttggtctcgttgccctgcatgtgaccaat
gttgatgccgatcacgagttcaccgaatttgttggagccacaatgtttgggacctacaat
ataatctctctggtggtgcttcttaatatgctcattgctatgatgaataattcctaccaa
catattgctgaccatgctgatattgagtggaagtttgccagaactaaactttggatgagc
tactttgaggagggtggcacactgcctcctcccttcaacatcattccaagtccaaaatca
gtgtggtacttaatcagatggatcaaggcgcactgcttcaatgttaaacacagaaaaaga
actgagacattcggatcactcgggatgcgagctgctgaaaacgttcgcacaaatcgccag
taccaggaggtactcagaaatctggttaaacggtatgtggcagcaatgattagagatgcc
aagaaagaagaaggattaactgaggagaactttaaggaacttaaacaggacatctcaagc
ttccgttacgaggtgatgggaatggtgaagggcacaaaaattggtgtgtcaaactccaaa
ggatgcacaggagcttcaaacctgtatcctgataactctatgaagtgcaattctacttca
gctggaagtcaactaaaaggcaaaatgagactgcagagtgtcgccacctctgtgatccaa
gagggtggacccaaagccaacgcctggatgtctggcctagcgaaaaacactgttagcaat
caaatgaactgcaaagggccaaacaacccaggagagatttactctgtgtcagaagaagct
ggagaatccgagagcgaagagcaggatgatggtgaacagcgtggaaatgagaaccaaaat
aatgaaacggagaaagacggactgaacgagacttcggaagaggatgaagaaatgacatat
atgcgctatatgtgtgaggaagaaatgaaagaggaaagcagattataa
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