Garra rufa (doctor fish): 141317320
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Entry
141317320 CDS
T11039
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141317320 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141317320 (crnkl1)
03036 Chromosome and associated proteins [BR:
grf03036
]
141317320 (crnkl1)
Spliceosome [BR:
grf03041
]
Complex B
Other components
Prp19-related factors
141317320 (crnkl1)
Complex C
141317320 (crnkl1)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
141317320 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_12
Mad3_BUB1_I
U3_assoc_6
EF-hand_Zip
Motif
Other DBs
NCBI-GeneID:
141317320
NCBI-ProteinID:
XP_073689162
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDSEELND
YKLRKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARSIYENFVMVHPEVKNWIKYATFEEKHGYVARARKVFERA
VEFFGEEHVNESLYVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGLGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQFEMSIDSDDRMQRCRQIYEEANKGMQNCEEKEERLMLLESWRDFE
DEFGSFANKERVQKLLPEKVKKRRKITAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKLQQEDEKEEDEEEEEEGGQQVPQGNEAQDSSESEEQGPAASREQPEKEYDDRDDD
DESRSSSDSESDGGDREDDKDKTEETKADTENH
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcggcgggtaaacagagaatcccgaaagtggcgaaggtgaagaataaa
gcacctgcagaggtgcagatcaccgccgagcagctgctcagagaggcgaaagaaagggaa
ctagagttgctgcctcctccacccaaacagaagatcactgattcagaagagctcaacgac
tataaactgagaaagagaaaggggtttgaagacaacatcagaaagaacagaactgtcatc
agcaactggatcaaatacgcacaatgggaggagagcctgaaggaggtccagagagctcgc
tctatctacgagcgtgcgctcgatgtggatcaccgcaatatcacgctgtggctgaagtat
gccgagatggagatgaagagccggcaggtgaatcacgctcgcaacatctgggaccgagcc
atcaccatcctgccccgtgtcaatcaattctggtacaagtacacctatatggaggagatg
ctgggaaacattgccggctgcaggcaggtgtttgagcgctggatggagtgggagccggag
gaacaggcctggcattcgtacatcaactttgagctgcgctataaggaagtggacaaggcc
cgcagcatctatgagaattttgtgatggtccatcctgaagtaaagaactggatcaagtac
gctaccttcgaagagaaacatggctatgtcgctcgagcgaggaaagtgtttgagagagcc
gtggagttttttggcgaggaacatgtcaacgagagtctctacgtggcttttgccagattt
gaggagaagcagaaagagtttgagagagttcgtgtcatctataaatacgctttagaccga
atccccaagcaacaggcccaggagctgtttaagaactacaccgtgtttgagaagaggttt
ggagacaggagaggaatcgaggacgtgattgtcagcaaaagacggtttcagtatgaagag
gaagtcaaggcaaacccacacaattatgatgcctggtttgattacctgcggctggtggag
agtgatgccgatgcagacacggttagagaagtgtacgagagagcgatagccaacataccc
cccatccaagagaagagacactggagacgctacatctatctgtggatcaactacgctctc
tatgaggagctggaggtcaaggaccctgagagaacaaggcaggtgtaccaggcatgtctg
gagcttataccacacaaaaagtttacgtttgccaagatttggctcttatatgggcagttt
gaaatccgacaaaaaaacctgcagaatgctagacgaggcctgggcaccggcatcggaaag
tgtcccaaaaacaaactgttcaaaggctacatcgagctggagctccagctgagggagttt
gaccgctgcaggaagctctacgagaagtatctggagttcagtccagaaaactgcaccaca
tggatcaagtttgcagagctggagaccatcctgggagacacagagcgggccagagccata
tttgaactggccattggacaaccgcggcttgacatgccagaggtgctgtggaagtcatac
atcgactttgagatcgagcaagaagaatatgataacacacgaggtctttataagagattg
ttacagcgtactcaacatgtcaaagtctggatcagctatgcccagtttgagatgtccatc
gatagcgacgaccgcatgcagcgatgcagacagatctatgaggaggccaataagggcatg
cagaactgcgaggagaaggaggaacgtctgatgctcctggagtcctggagagactttgag
gacgagttcggatcattcgccaacaaggagagagtccagaaactcctgccggagaaggtg
aagaagaggagaaagatcacagcagaggatgggtcggatgcaggctgggaggaatattac
gactacatcttcccagaggacgctgccaaccagcccaacctcaaactgctggccatggcc
aagatgtggaagaaactgcagcaggaggatgagaaagaggaggatgaagaagaagaagaa
gaaggaggacagcaggtccctcaaggaaatgaagcacaggatagctcagaatcagaggag
cagggacctgcggccagcagagaacagcctgaaaaagagtatgacgatcgtgacgatgat
gacgagagccgtagcagcagtgacagcgagagtgatggtggcgaccgtgaagatgacaaa
gacaagacggaagaaacaaaagcagacacagaaaatcactga
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integrated database retrieval system
