Garra rufa (doctor fish): 141331875
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Entry
141331875 CDS
T11039
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecule (CAM) interaction
grf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
141331875 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
141331875 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141331875 (cdh5)
04090 CD molecules [BR:
grf04090
]
141331875 (cdh5)
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141331875 (cdh5)
CD molecules [BR:
grf04090
]
Proteins
141331875 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
DUF6859
Motif
Other DBs
NCBI-GeneID:
141331875
NCBI-ProteinID:
XP_073693013
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All DBs
Position
3:complement(26695561..26716017)
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AA seq
767 aa
AA seq
DB search
MMKQSAWRQMTEPGFWAGVLVVLCTLSVGADVHQALKTPSMPSKVLQRHKRAWKWDKLYV
NEEMPTKSPIKIGKLENTFFTSSARYNLSGEGANDIFTVNDNGDILVHVKLDREEKSVYK
LSASLFNNDFKRQLDQDDTFVIVVLDINDNSPVFPPDISGSITESSRAGTIVMTVKATDA
DDPTTQNGMVGYKLLNGTDLFSINNDGEIRTLTSTLDREKQSQYLIAIQAKDMPEVTSGN
LATTIVTININDINDNIATFKSREYRYSVKEDSKPGYQIGILGVEDKDEIQNKDPTFTIH
KFGEVFEMKQSNLKDGVLSLKMPLDFETLNAYTFSVNVDEQTVSKPPDNRGPNLLTRAQV
FISVIDVDEPPVFSRNEYKFSIDEGPFKNSVIGAVSAKDPDATAYKIRYSIEDPNCPVTV
DPVHGHLSLKKQLDREEESSYLFQVTAHEDIPNGLKSYAKVNLTVLDINDNAPELTNGRD
VYVCESDKPGTIIGTVGASDKDENPGRFRFTLAKRSSNFSLTDNQNNTASIRLRQGGFST
EHSVEHVLEIEIVDGGTPEQKSINLLQIKVCTCQAERRVEYCMAYAQTGMSVSAILAILL
CIVTILVIVILMVLRRRYQKEVLVTKSSGEIHEQLVRYDEEGGGEMDTNGYDVSILSSAC
HDGSFQPATGPSLYAVVKKPSACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGSES
LAGSLSSLDSSSTGSNYDYDFLHEWGPRFRTLAQLYGVDGSDTDSSD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagtctgcctggaggcagatgactgagcctggcttctgggcaggtgtccta
gtcgttttatgtaccctcagcgtaggagctgatgtccaccaagctctgaaaacgccatca
atgccgagcaaagtgcttcaaaggcataagagagcctggaaatgggataaactttatgtg
aatgaggaaatgcctacaaaaagccctataaaaattggaaagctggagaatacatttttc
acttcatctgcaagatataatctctcaggagaaggtgctaacgatatttttactgtaaat
gacaatggggatattcttgtccatgtaaagttggaccgggaggagaaaagcgtctacaaa
ctgtcagcttcactcttcaacaatgatttcaaaaggcagcttgaccaagatgatacgttt
gtaatagtggtcttggatattaatgacaatagccctgtgtttccacctgacatctctgga
tccatcaccgaatcttctagagcaggaacaatagtaatgactgtaaaagcaactgatgct
gatgatcccaccactcaaaatggaatggttgggtataaattgttaaatgggacagatctc
ttcagcatcaacaatgacggtgaaatcaggacattgacaagcacccttgaccgagagaaa
cagagtcagtatctaattgctatacaagccaaagacatgcccgaagttactagtgggaat
ttagctactaccattgtgactatcaacattaatgatataaatgacaacattgccaccttc
aagtcaagggaataccgatatagtgtaaaagaagacagcaaacctggatatcaaattggc
atattaggagtggaggacaaagacgagatacaaaacaaagatccaacttttactatacat
aaatttggtgaagtgtttgaaatgaaacaaagtaatttgaaagatggagttcttagcctt
aaaatgcctctcgactttgaaacgctgaacgcatacacattcagtgtaaacgtggacgag
caaacagtatctaaaccaccagataaccgaggacccaacctgctgacgagagcccaagtt
ttcatcagtgtaattgatgttgacgagccacctgttttcagccgaaatgaatacaagttc
agcatcgacgagggcccattcaagaattcagtcattggagctgtttcagcaaaggatcca
gatgcaactgcttacaaaatacggtactctattgaagacccaaactgtcctgtaactgtg
gatcctgtacatggacatctgtccttaaagaagcaactggacagagaggaagaatcctcg
tacctattccaggtcacagcacatgaggatataccaaatggtctaaagtcctatgcgaag
gttaatctgacggttcttgacattaatgataatgcaccagaactaactaacgggagagac
gtgtatgtctgtgagagtgataaacctggaacgatcatcgggactgtgggtgcttccgac
aaggatgaaaatccaggcagattccgtttcactctggcaaaaaggagctcaaacttttcc
cttactgacaatcaaaataacactgcgagcattaggctgaggcaaggcggtttcagtaca
gagcactcagtggagcatgtgctggaaatcgaaatcgtggacggaggtacaccagaacag
aagagcattaacctcctccagattaaagtgtgcacgtgccaggcggagcgacgggtggag
tactgtatggcctacgcccagaccggaatgagcgtcagcgccatcttagccattcttctc
tgcatcgtcaccatcctggtcatcgtcatccttatggtgttgaggaggcgctatcagaaa
gaagtgttggttaccaagtcttctggcgagatccacgagcagctggtgagatatgacgag
gaaggcggtggagaaatggacaccaacggttatgatgtttccatcctgtcctcagcctgt
cacgacggcagctttcagcccgccacggggccttcgctctacgccgtggtgaagaaaccc
tctgcttgtaagggggacatggccgtgatgatcgaggtgaagaaagatgaggctgaccat
gaccgagatgggattccctatgacactttacacatctacggctatgagggatctgagtcc
ttggctggttctctcagttctttggactcatcctccactgggtccaattacgactatgac
ttcttgcacgagtggggacctcgtttcaggaccctggctcagctctatggagtagatggc
tcagacactgacagctccgactga
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