Garra rufa (doctor fish): 141333149
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Entry
141333149 CDS
T11039
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141333149 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141333149 (nup107)
03036 Chromosome and associated proteins [BR:
grf03036
]
141333149 (nup107)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141333149 (nup107)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141333149 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
HisK_sensor
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
141333149
NCBI-ProteinID:
XP_073694186
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All DBs
Position
4:complement(24407488..24421679)
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AA seq
918 aa
AA seq
DB search
MDFNQTWLSPVVRDTEVTRAARRKSSHKKVAFPLAQDDSPGTSTTPARPLLRQTPGSLLK
QTFTPRSALRNPDVSAILGTGGRTPRFVNTPRTRGSLSMNLDDSDWTNSLFPSPLSGMVD
TSFTEDVSMSALMLKEDDPGEAASLSLFPEFLQSYLRHASTAVFDLLEEYEALCQDKVSI
LQKMVLRSAPGQQKSSKTVSITWLLQQEMVTWRLITSLYRDRVQTVLEEDIMMDITMPTE
SEKAVMEQFFQKDSMVRQSQLVVDWLESIAKDDIGDFSDNIEYYAKSVYWENTLHTLKLR
RNQSSGGFSRPLVTELDPDAPIRQKRPLADLDREDDTRLLKNLFNLIRAGMTDEAQRLCK
RCGQAWRAATLEGWKLYHDPNINRGGGELQAVEGNPHRSVWKVCCWRMAEEEQFNKYERA
IYAALSGNLKHLLPVCESWEDTVWAYFRVMVDTLVEQEICSSGLGSEELEELPREFLETN
WTLEKVFEELQATESKRVLDATKEHYHLIQKFVILGDLDGLLEEFSDWLGRSTPLPAHLL
RFMSHLVLFYRSLGMQLKEDVCVDVLKAYISLLVKEKQVDLIAFYVSHLPADMAVSQYAQ
FLEEVTETEQRKQCLELATQAGLEVAAITKTVVETIRERDTDEFAHHDLTPALDTVTTVE
DQQKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHDAAKMVFAKVPEDSMREIYRQW
EEQGMDTPLPAEEENAIREHLCIRAYLEAHEAFNEWFKHMNCPPVKPTAPAQAKFTEKVA
HEMKEAEYKIEYENWQGRLGALTEDVKERIYNVLLFVDGGWMVDVREDAEEDSERAHQMT
LLRRLCLPMMSFLLLTVLQRTERHQESLRLADIIASDQHKLYEVFSKEELQNFLQKMRES
SLLLLDKGLDPLGYEIQH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggactttaaccagacctggttgagtccagtggttcgggacactgaggtgacccgtgct
gcccgcaggaagagttcacacaaaaaagtggcattcccactggcacaggatgacagtcct
ggcaccagcactactcctgctagaccactactgcgccaaacacctggatctctcctcaaa
caaactttcaccccaagaagtgccctcaggaacccagatgtgtcggctatcctcggtaca
ggaggcagaactcctcgctttgtcaacacaccccggaccagaggcagtctgagcatgaac
ttggatgacagtgattggacaaacagtcttttcccatctcctctgtctgggatggtggac
accagcttcactgaggatgtcagcatgagtgctctcatgctaaaggaagatgatcccgga
gaggctgcttctctcagtttgtttcctgaatttctgcaatcatatttgcgtcatgcgtcc
acagctgtgtttgatcttttagaggagtatgaggctctctgtcaggataaggttagtatt
ttgcagaaaatggttcttcgatcggctcctggtcagcagaaatcctccaagacagtcagc
atcacctggttgctgcagcaagagatggtgacctggagactcataacctcattgtacaga
gacagagtccagacagttttagaagaagacatcatgatggatataactatgcccactgag
agtgagaaggccgtaatggagcagttcttccagaaggacagtatggtccgacagagccag
ctggtggtggattggttggagagtatcgccaaagatgacataggagacttctctgataac
attgaatactacgccaaatctgtgtactgggagaacacactccacaccctgaagctgagg
aggaatcagtccagtggtggattcagcaggccgctggtcacagaactggatccagatgct
cccattagacagaagaggccactggcagacctggacagagaggacgacacacgcctgctc
aaaaacctctttaacctcatacgagctggcatgactgatgaggctcagaggctgtgtaag
cgctgtggtcaggcctggcgagctgccactctggaaggctggaaactgtatcatgacccc
aacatcaacagaggaggtggagagcttcaggcagtggagggaaatcctcatcgaagcgtg
tggaaggtttgctgttggagaatggcagaggaggagcagttcaacaaatatgaaagagcc
atctatgctgcactgagtggaaaccttaaacatctgttacccgtgtgcgagtcgtgggag
gacacagtgtgggcgtatttccgggtgatggtggacactctggtagaacaggagatctgt
tcttctggcttgggcagtgaagaactggaggagctgcccagagagttcctggagaccaat
tggacgttggagaaagtttttgaagaacttcaagcaacagaatccaaaagggttctggat
gcaaccaaggaacattaccatttgattcagaagtttgtcattcttggagatcttgatggt
cttctggaagagttcagtgattggttgggaagaagtacacctttgccagctcatctgctg
cggttcatgtcacatttagtgttgttttatcgcagtttgggcatgcaactcaaggaggat
gtgtgtgtagatgtcttgaaggcctacatctccctgctagtaaaggaaaagcaggtggat
ctcattgcattttacgtcagtcaccttcctgccgacatggctgtgtcacaatacgctcag
ttcctggaggaagtcacggagactgagcagcgcaaacaatgtctggagttggcaacacaa
gcaggtttggaagtggcagcaatcacaaaaaccgtagtagagaccatcagagaaagagac
acagatgagtttgcccaccatgacctgacccctgcattggatactgtaactacagtggag
gatcagcagaagattgatgtcattgactggctggtgtttgatcctgcacagcgagctgaa
gcccttaaacagagcaatgccatcatgaggaagttcttagcatctaagaagcacgacgct
gctaagatggtcttcgccaaagtgccggaagattccatgcgagaaatctaccgccaatgg
gaggagcagggcatggacacaccccttcctgccgaggaggaaaatgctattcgtgagcac
ctgtgcattcgtgcctatctggaagctcacgaagcatttaatgagtggttcaagcacatg
aactgtcctccggtgaaacccacagcacctgctcaagcaaagtttacagagaaagtggcc
catgagatgaaagaagcagagtacaagatagagtacgagaactggcaggggcgtctggga
gcattgacagaggatgtgaaggagaggatttataatgtgctgctgtttgtagatggaggc
tggatggtggatgtcagagaggacgctgaggaagactctgaacgtgctcatcagatgact
ctgctgcggcgtttgtgtctgcccatgatgtcattccttctgttaaccgtactgcagcgc
actgaacgccaccaggagagtctgcgtctggctgacatcatcgcatctgaccaacacaaa
ctatacgaggttttctctaaagaggagctgcagaactttctccagaagatgagggaatcc
tctctactcctgctggataaaggtctggatccacttggatatgagattcagcattag
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