Garra rufa (doctor fish): 141335668
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Entry
141335668 CDS
T11039
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00514
Other types of O-glycan biosynthesis
grf00515
Mannose type O-glycan biosynthesis
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
141335668 (pomt1)
00514 Other types of O-glycan biosynthesis
141335668 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141335668 (pomt1)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
141335668 (pomt1)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
O-linked Man type
141335668 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
PMT_2
Motif
Other DBs
NCBI-GeneID:
141335668
NCBI-ProteinID:
XP_073697300
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All DBs
Position
5:complement(17582902..17593069)
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AA seq
721 aa
AA seq
DB search
MQCVKLPISLTVEINLLLLAVTALALVTRLYGIHFPKAVVFDEVYYGQFLSLYMKQVFFI
DESGPPFGHMVLALGAYLGGFDGNFVWNRIGAEYTSNVPVWSLRVIPALAGSMCIPLAYL
LVVELGYSHFSALGACVLLLMENSLIVQSRFMLLESVLIFFLLLAVLSYLRFHKAQKNSS
FRWFWLVICGFSCAFGIGVKYMGMFTYVLLLGLAAVHTWQLIGDRALSHGKVVVEVMVRF
LALVVLPIIMYLGFFYIHLTLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLDVAFGSQ
VTLRTVSSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRHSV
VVSSPPRPVRHGDIVQLLHGMTSRYLNTHDVAAPMSPHSQEVSGYIDFNVSMPAQNLWRV
DIMNRESDREIWKTILSEVRLVHVNTSAVLKLSGVSLPEWGFKQLEVVGDKIYKGYQQSS
MWNVEEHRYGRSQEQKERELELKSPTQSDIKRNLTFMAKFLELQWKMLTVKNEESEHKYS
SSPFEWITMDTNIAYWLHPSSNAQIQLIGNIVNWSIANLALVVYCLMFLTYLLRRRRKVE
DVPQDSWEQLVLAGVVCFGGWAVNYLPFFLMEKTLFLYHYLPALTFKILQIPMVVEHLYI
HVLRSPAQQKAFGGVILAVLCSVYVSYHNLSPLTYGQPALSSDELAALRWRESWDILLRK
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgtgaaactgcctatcagtctgacagtggagatcaatctgctgctgctggca
gtgacagcattagcgcttgtgaccagactatatggcattcactttcctaaagctgtagtg
tttgatgaagtttattacggacagtttctgtctctgtacatgaagcaagtgtttttcatt
gatgagagtggaccaccttttggccacatggtattagctttaggagcatatttaggagga
tttgatggcaactttgtttggaacagaattggagcagaatacaccagtaatgttcctgtt
tggagtcttcgggtaataccggcccttgctggctccatgtgtataccacttgcttacctt
ctggtggtggagctcggatattcccatttctcagcattgggggcctgtgtgctgctcctc
atggaaaactccttgattgtacaatcacgtttcatgctgctggagtctgttttaatcttt
ttcctgctgttagctgtgctgtcttacctccgcttccacaaagcacaaaaaaattcatct
tttaggtggttttggcttgtgatctgcgggttcagttgtgcatttggaataggggtaaaa
tacatgggtatgttcacatacgttttactgctaggcctggcagctgtacacacctggcaa
cttattggagatcgagctttaagccatggcaaagtagtggtggaggtaatggttcgcttc
ctggctcttgtggtgttacccatcatcatgtaccttggatttttctacatccatcttacc
ctgctgtatcgcagtggaccacatgatcagatgatgagcagtgcttttcaagcaagtcta
gagggtggtctagcgcggatcactcaggggcagcccttggatgttgcattcggctcacaa
gtcactcttcgcactgtgtccagtaaacctgttccatgttggcttcactctcacaaggct
aactatccaatcagatatgaaaatggccgtggtagttcccaccaacagcaggtgacctgc
tatcctttcaaagatgtcaacaactggtggattattaaagaccctgggcggcacagtgtt
gtggtcagcagcccacccagacctgtcagacatggagatattgttcagctgctacatgga
atgacctctcgctacctaaacacacatgatgttgcagccccaatgagtcctcattcacag
gaagtttctggctacattgactttaatgtgtctatgccggctcaaaatctatggagagtg
gacataatgaacagggagtccgacagagagatctggaagacgattttatccgaggtgcga
ctagtccacgtgaacacttcagctgttttaaagctcagtggagtgtctctgccagagtgg
ggttttaaacagctggaggtggttggggataagatttataaaggctaccagcagagcagc
atgtggaacgtggaagagcaccgctatggcagaagtcaggaacagaaggaaagggagttg
gagctgaaatcacctactcaaagcgacatcaagagaaacctcacttttatggccaaattt
cttgagctgcagtggaagatgctgacagtaaagaatgaagagtctgaacacaaatatagt
tcatcaccctttgaatggatcacgatggacaccaacattgcatactggcttcatccttca
agtaatgcacaaattcaactgatagggaatattgttaattggtccattgcaaaccttgca
ctagttgtttactgtcttatgtttttaacctacttactaagacgacggaggaaagttgaa
gacgttcctcaagactcttgggagcagctggttttggctggtgttgtttgttttggaggc
tgggcagtgaattacctgccattcttcctaatggagaagactctgtttttgtatcactat
cttccagcgcttaccttcaagatcttacagatacctatggttgtagagcacctgtacatc
catgtattgagatccccagctcaacagaaagcatttggtggtgttattctggcagtcctt
tgttcagtatatgtatcctaccacaacttgagtcctctgacctacggccagccagcgcta
tcatcagacgagcttgctgctctacgttggagagagagctgggatattctcctacgaaaa
cgctga
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