Garra rufa (doctor fish): 141335857
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Entry
141335857 CDS
T11039
Name
(RefSeq) heat shock 70 kDa protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf04010
MAPK signaling pathway
grf04141
Protein processing in endoplasmic reticulum
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141335857
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141335857
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141335857
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141335857
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141335857
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141335857
03009 Ribosome biogenesis [BR:
grf03009
]
141335857
03110 Chaperones and folding catalysts [BR:
grf03110
]
141335857
04131 Membrane trafficking [BR:
grf04131
]
141335857
03051 Proteasome [BR:
grf03051
]
141335857
03029 Mitochondrial biogenesis [BR:
grf03029
]
141335857
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141335857
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
141335857
Spliceosome [BR:
grf03041
]
Complex B
Other components
Prp19 complex
141335857
Complex C
Prp19-CDC5 complex
141335857
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141335857
Chaperones and folding catalysts [BR:
grf03110
]
Heat shock proteins
HSP70 / DNAK
141335857
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
141335857
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
141335857
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
141335857
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
141335857
Exosome [BR:
grf04147
]
Exosomal proteins
Proteins found in most exosomes
141335857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
FtsA
Hydantoinase_A
MIF4G
Motif
Other DBs
NCBI-GeneID:
141335857
NCBI-ProteinID:
XP_073697516
LinkDB
All DBs
Position
1:45130894..45133573
Genome browser
AA seq
643 aa
AA seq
DB search
MSSAKGVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPNNTVFDAKRLIGRKFDDPVVQSDMKHWSFQVVSDGGKPKVQVEYKGENKTFNPEE
ISSMVLVKMKEIAEAYLGQKVTNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDKGKASERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDYYTSIT
RARFEELCADLFRGTLDPVEKALRDAKMDKSQINDIVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILMGDTSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNT
TIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEADKYKAEDDMQREKIAA
KNSLESYAFNMKSSVEDEKLKDKISEDDKKKVIEKCNEAISWLENNQLAEKEEFEHQLKE
LEKVCNPVITKLYQGGMPAGGCGAQARAASGAGAQGPTIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagcaaaaggagttgctattggaattgacctgggcaccacctactcctgtgtg
ggggtgtttcagcatggaaaagtggagatcatcgccaatgaccagggaaacagaacaaca
cccagctatgttgccttcacagacactgagaggctcattggagacgcagctaaaaaccag
gtggccatgaaccccaacaacactgtgtttgatgctaagaggctgatcggcagaaagttt
gatgacccggttgtgcagtctgacatgaagcactggtctttccaagtcgtcagtgatgga
ggaaagccaaaagttcaagttgaatacaaaggagagaacaagacatttaatcctgaagag
atttcttctatggtcctggtgaagatgaaggagattgctgaagcttatctgggacaaaag
gtgacaaatgcagttgtcacagttcctgcctatttcaatgactcccagaggcaagcgact
aaagacgctggagtaatcgctggactgaatgtcctcagaatcatcaacgagcccacagct
gcagccattgcctacggccttgacaaaggaaaagcttcagagcgcaacgtcttgatcttt
gacctgggcggaggcacctttgatgtgtccatcctgaccattgaagatggcatctttgag
gtgaaggccacagctggagacactcatctgggtggagaggactttgacaaccgcatggtg
aatcactttgttgaagaattcaagaggaagcacaagaaggacatcagtcagaacaagagg
gccctgaggaggctgcgtacagcatgtgagcgagccaagcgaaccctctcctccagctct
caggccagcattgagatcgactcactgttcgagggcatcgactactacacgtccatcacc
agagctcgctttgaagagctttgcgcagacctcttcagaggaacacttgatcctgtggaa
aaagccctgagagacgccaagatggacaagtcccagatcaatgacattgtgttggttggt
ggatcaacaagaattccaaagatccagaagcttctgcaggatttcttcaacggcagagag
ttgaacaagagcatcaatccagatgaggcagtggcttacggtgctgcggttcaagccgcc
atcctcatgggagacacatctgaaaatgtccaggatctgctgctgctggatgtggcgcca
ctgtctctgggtattgaaaccgcaggtggagtcatgacggccctcatcaaacgcaacacc
accatccccaccaaacagacccagaccttcaccacctactcagacaatcagcctggtgtc
ctgatccaggtctatgagggagagagggccatgacaaaagacaacaacctgctgggtaaa
tttgagctgacaggaattccacctgcaccacgtggagtcccacagattgaagtgaccttt
gacatcgatgccaacggaatcctaaacgtgtcagcggtggacaaaagcactggaaaagag
aacaagatcaccatcactaatgacaagggcagactgagtaaagaggacattgagaggatg
gtgcaggaagcagacaagtacaaagcagaagatgatatgcaaagagagaagattgctgcc
aaaaactctctggagtcttacgccttcaacatgaagagcagtgtggaagatgagaaacta
aaagacaagatcagtgaggatgacaagaagaaggttattgagaaatgtaacgaggccatc
agttggctagaaaacaaccagctggctgaaaaggaggagtttgaacatcagctgaaggag
ctggagaaagtctgcaatccagtcatcactaaactgtaccagggagggatgccagctgga
ggatgtggagctcaggcacgtgcagcatcaggagccggtgctcaggggccaactattgaa
gaggtggattaa
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