Garra rufa (doctor fish): 141336700
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Entry
141336700 CDS
T11039
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141336700 (znf827)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141336700 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_4
zf-Di19
zf-C2H2_6
zf-C2H2_5
zf-C2H2_jaz
CENP-N
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
141336700
NCBI-ProteinID:
XP_073698520
LinkDB
All DBs
Position
6:complement(20192120..20296645)
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AA seq
1411 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDTVEDGGPEGGSVEEDSWFGNTSDSPSESSYGDVQDELRVSPDN
VPRPDHDTSAESSLGCPTPVQRASLELLGLDSGVLSTQDMLSSEVSSLYGDSSQALGKPL
SSNLRRLLEAGSLKLEGGDLTGRGTGRGQESPPVSLVLSPSSHHAQQLSALARRLANSSS
NNSGNSNSASPASVATVKQEPCDPYGPSNGPNSGSSGFVWVGVADKWPSTSCSAPSGSSL
SPDSAIQKLKAAANAVLQDKSAVASSTSASSSSSSSSSSSSVTSSSMAALGTRSDDAVRF
EPFASPFSPQSASSTLAALSKKVSERSQQQVGSSEHQPSAGSFLSLVSMTSSAALLKEVA
ARAAGNLLADKKEPALVLGASEDVKPLLDRNQKVPTPTQTMDLLLPTIPKGRAKPSSQAG
SPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQ
HQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRPDLKVKEEPGTDTEEGEGLLMGDGG
VAGDQVMNTDASTSPTVSQPDGRLLASPAEPSNHVQIKEEPQERDVSVMSPFTLCRERPS
SSSSSLDLPGFKSSPPGPGPTAASLFSPDITTKTATDLLIKLSAANQKEALKGPFCVKEE
PQAEEPLSSQRGPSYSFCQEGPPGSTKPREEGSPMLGKSSLLSQDINVKVASELLMKLSE
NNKEACHQNVIVKAEPMEVDPPLELAPPSSHLLGFSTSGACEKKESMVNLPDPLPRPQND
LFSQDISVKMASELLFKLSEKVSKANENKDNASFGIHSPFLDDRFRQSPFSTRSKSSSPA
EAGSSSRVAQQDPEKVCSEPGNGLAQWRLNEQLFPCPVCGKVFGRQQTLSRHLSLHTEER
KYKCHLCPYAAKCRANLNQHLTIHSVKLVNTDAEQIVTAVTNEGPELKNCPYYYSCHVCG
FQTELNAQFVSHMSLHVDKEQWMFSLCCSTCEYVGVDEAEMKAHISAGHTGLNSRSPLSE
TKSTSSSLSALSDSLNSSEGGDVAQGNEELKSLLAPPSSVGSQSSSGLGTEEKAEKGFEC
VFCNFVCKTRPMYERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPAGGLKCPLC
IYSTNRPAAMEGHLKTHYKMEYRCRICQAVWANQAELERHTRAHRLGNHYKCEQCGYLSK
TANKLIEHVRVHTGERPFHCDRCSYSCKRKDNLNLHKRLKHAPRQTFGCAQCPFTTTHPF
VYSRHVKKHQGGEGSAEEGEARPGTPRPGLLERGGSSSGSGDSGSTSPLMNLSASQALQS
VALSITSKQQDGTPTTRYLSANGTFSTLAARYLEQYRNCDLAHLIPLTTLFTARRFTFHS
PSPSNSSPPSPTSLKHSFLAYLGLTERAKTI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaaacaggagcaacccaagcgcctgccttcacatgtggacacggtagag
gatggagggccagagggtggctcagtagaggaggacagctggtttgggaatacttccgac
agcccctctgaatcatcctacggtgatgtgcaagatgagctgcgggtttccccggacaat
gttccccgaccggaccacgacacctcagccgagagctccctcggctgccctacgccagtt
cagcgggcttccctggagctgctggggctggacagtggggtcctctcgacccaggacatg
ctgtcctctgaggtgtcctctctttacggagattccagccaggccctgggcaagcccctc
agcagcaacctgcggcgtctcctggaggctggctcgctgaagctggagggaggggacctg
acggggcgtggaacgggcagaggacaagagtcgcccccggtcagcttggtactatcccca
tcttcgcatcacgcacagcagctgagtgccctggcgaggaggttggctaacagcagcagc
aacaacagtggcaactcgaactctgcatcacccgcgtctgtagcaactgtcaagcaggag
ccctgtgacccatatggccccagcaatgggcctaactcaggcagcagtggctttgtatgg
gtaggcgttgcagataaatggccgtcgactagttgctcggctcccagtggcagcagtctg
tcgccagactcagctatccaaaagttaaaggcggccgccaacgccgtgctccaagacaag
agcgcggtggcctcctccacctcggcgtcctcatcctcctcttcctcctcctcgtcctct
tcggtcacctcctcatcaatggcagccctgggcactcgttctgatgacgcggtgcgcttt
gaaccgttcgcttcacccttcagtccgcagtcggccagctctacgcttgctgccctctca
aagaaagtgtctgaaagaagtcagcagcaggtgggctcatctgagcatcaaccctcagct
ggctcctttctctctctggtttccatgacctcctcagcagctctgctaaaggaggtggcc
gcacgagcagcggggaaccttctagctgataagaaagagccggcattagtactgggagcc
tccgaagatgtcaagcccctgttagacaggaaccagaaggtgcccaccccaacccagacc
atggatcttctgctgccaacaatccccaagggaagggccaagcccagcagtcaagcaggt
tctcctgaggatggagggaagccctttcagtgcccagtgtgtggtctggtcatcaagaga
aagagctactggaagagacatatggtgatccacacaggcttaaaaagtcaccagtgtccc
ctttgtccctttcgctgtgctcgtaaagacaatctcaagtcccacatgaaggtccatcag
caccaagaccgaggagagactttccaatgcgagctctgccccttcacatcctcccgccac
tttagcctcaagctgcacatgcgttgccatcagcacttcccccgtcccgacctcaaagtc
aaagaagaacccggcacagacaccgaggagggcgagggcttgctcatgggggacggtgga
gtcgctggcgatcaggtcatgaacacagatgcttccacgtctcccactgtgagccaaccc
gacggccgtttgctggcctcccctgcagaaccctcgaaccacgtccagatcaaggaggaa
ccccaggagagggatgtgtctgtgatgtctccctttaccttgtgtagggagcgacctagc
agcagcagcagttctctggatctgcctgggtttaaatccagtccaccagggcctggccct
acagctgcctcactcttcagcccagatatcaccaccaagacggctacggacctccttata
aagctctcagcagcgaaccagaaggaggccctaaagggtccattctgtgtcaaggaggag
ccccaggcggaagagcccctgagctctcagaggggaccaagctatagcttctgccaagaa
ggacccccagggtccaccaagccacgagaggaggggagcccgatgttgggcaagagcagc
ctactcagccaggacatcaacgtcaaagtggcctctgaactgcttatgaagctctcagag
aataacaaagaagcttgccaccagaacgtcatagtgaaggcggagcctatggaagtggat
ccgcccctagaattggcccctccctcctcccatctactgggcttcagcacttcaggggca
tgtgagaagaaggaatcaatggtcaacctcccagatcctttgccccgcccccaaaatgac
ctcttctcccaggacatatctgtcaaaatggcctccgagctgcttttcaaattgtctgaa
aaagtaagtaaagctaacgaaaacaaagacaatgcatcattcggtatacacagccccttc
ctagatgaccgctttagacaatcacctttcagcacgcgctccaagagctcttccccagct
gaagccggatcttcaagcagggttgcccagcaagatccagagaaggtgtgtagtgagcca
ggaaatggactcgcccaatggagactcaacgaacagctctttccctgccctgtttgtggc
aaagtgtttggtcgccaacagactctatccagacatctctccctacatacagaagaaagg
aaatataagtgtcatttgtgtccgtacgcggctaagtgccgagccaacctcaaccagcac
ctcacaatccactcggtcaaactggtgaacacagatgccgagcagatcgttactgctgtt
accaacgaaggcccagagctcaaaaactgcccctactactacagctgccacgtctgcggc
tttcagacagagttgaatgctcagtttgtcagtcatatgtctcttcatgtagacaaagag
cagtggatgttctctctttgctgtagcacctgtgagtatgtgggagtggacgaggctgag
atgaaggctcacatcagtgcaggacacacaggtctcaattctagaagccctctcagtgag
accaagagcacttcctcctctctctcagccctcagcgactccctcaacagctctgaaggt
ggagatgttgcccaaggtaacgaagaactaaaaagccttttggccccgccttcttctgtc
ggcagtcaatcaagctcaggcctaggaacagaggaaaaagcagagaaaggctttgaatgc
gtcttctgcaactttgtgtgtaaaacacgacctatgtacgagcggcacctacagatccac
ctgatcacgcgcatgttcgagtgcgacgtctgccacaagttcatgaagacacccgagcag
ctcctggagcacaagaagtgccacaccgtccccgctggagggctcaagtgccctctctgc
atctactccaccaacaggccagccgcaatggagggccacctgaagacgcactacaagatg
gagtatcgctgccgcatctgccaagccgtgtgggccaatcaggcagagctggaaaggcac
acgcgcgctcaccgcctgggcaaccactacaagtgcgagcagtgcggctacctctccaaa
acagccaacaagctcatcgagcacgtgcgcgtgcacaccggcgagcggcctttccactgc
gaccgctgcagctacagctgcaaacgcaaggacaatctcaacctccacaagcggctcaag
cacgcgccgagacagaccttcggctgcgcccagtgcccgttcaccaccactcacccgttc
gtctacagccgccacgttaaaaagcaccaaggcggggaggggagcgccgaggaaggtgag
gctcggccaggcacgccacgtccgggccttttggagcgaggtgggagcagcagcgggagc
ggggacagcgggagcaccagtccgctcatgaacctgtccgcctctcaagccttgcagtcc
gtcgccctgtcgatcaccagcaagcagcaagacggcaccccaaccacgcgctacctctcg
gccaacggcacgttctccacactggcggctcgctacttggaacagtacaggaactgtgac
ctggctcacctcatccccctcaccacgctctttacggcccgccgcttcacattccacagc
ccctcgccctcaaactcctcgccaccctctcccacgtcactcaaacactccttcctggca
tacctgggattgacagagagagctaagaccatttga
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