KEGG   Garra rufa (doctor fish): 141338570
Entry
141338570         CDS       T11039                                 
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:grf03036]
    141338570
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     141338570
    COMPASS/SET1 complex (yeast)
     141338570
    MLL-HCF complex
     141338570
    MLL3/MLL4 complex
     141338570
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_Gbeta Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_LRRK2 Beta-prop_NUP159_NUP214 WDR54 Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR11_1st Beta-prop_RIG_1st Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 141338570
NCBI-ProteinID: XP_073700260
LinkDB
Position
7:complement(11802336..11821571)
AA seq 537 aa
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLSWSRDGHKLVSASTDNIVSQWDVLTGDCDQRFRFPSPILKLQYHPRDM
DKVLVCPMKSAPVLLTLSDSKHVVLPVDDDSDLNVVAAFDRRGEYIYTGNAKGKILVLNT
NTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKRCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIPAFCSSDEELEDYKALLYLPIAPEVEDPEENPFGPPP
DAAGQNATPDDGSAHSGPGDKKQRQPSSDGGPPKKKIRTTTIELQGVPSDEVHPLLGVKG
DSKSKKKAAGRPKGSKGKDKDSPFRPKVCRDRAEGLVGTPGNLVAAAYKQHEVQGLD
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgaatctggagttgctcgaatcgttcgggcagaattatccagaggaggcagatggcact
ctggactgcatcagcatggctctgacctgcacgtttaaccgctggggcacgctgctcgcc
gtcggctgtaacgacggacgcatcgtcatctgggacttcctgacgcgaggaatcgccaaa
atcatcagcgcacacatacaccccgtctgctcgctcagctggagcagagacggacacaag
ctggtcagcgcctccaccgacaacatcgtgtctcagtgggacgtcctgacgggagactgc
gaccagcgcttccgcttcccctcgcccatcctcaagctgcagtaccaccccagagacatg
gacaaggtgctggtgtgtcccatgaagtcggcgcctgtcctgctcacactgtctgactcc
aaacacgtggtgctgccggtggatgacgactcggatctgaacgtggtggcagcgttcgac
cggcgcggggagtacatctacactggcaatgccaaaggaaagattctggtgctaaatacg
aacacacaggaccttgtggcgtcgttcagagtgacaacaggaaccagcaacaccaccgcc
atcaaatccatcgagtttgcacgcaagggcagctgttttctcatcaacacggcagaccgc
atcatccgcgtgtacgacggccgagaaatcctgacgtgtggcagagacggagaacccgaa
cccatgcagaaactacaggacttggtcaacaggacgccgtggaagcgctgctgtttttcg
ggtgacggcgagtatatcgtggcaggatcggcgaggcagcacgcgctctacatctgggag
aagagcatcgggaacctggtgaagatcctccacgggacgcgaggagagctgctgctggac
gtcgcctggcatccggtgcggccaatcatcgcctccatctccagcggcgtggtgtccatc
tgggcccagaaccaagtggagaactggagcgcgtttgcgccagactttaaagagctggat
gagaacgtggagtatgaggagagagaatcagagtttgacatcgaggacgaggacaagagc
gaacctgagcagaccggtgcggacgctgctgaagacgaggaggtggacgtcacatcagtt
gatcctatcccagcattctgcagcagcgacgaggagctggaggactacaaagcgctgctg
tatctgcccatcgctccagaagtggaggaccctgaggagaatccgttcggtcctccgccg
gacgccgcgggtcagaacgccacgcccgacgatggctccgcccacagcggccccggagac
aaaaaacagcggcagccctcgtctgacggaggcccgcccaagaagaagatccgcaccacc
accatcgagctgcagggcgtccccagcgacgaggtgcatccgctgctgggcgtgaagggc
gacagtaagtcgaagaagaaggcggcggggcggcccaagggatctaaaggtaaagacaaa
gactctccgttcagacccaaagtgtgccgggacagagcggaggggctggtggggacgcca
ggaaatttggtcgcggcggcgtacaagcagcacgaggttcagggtttggactga

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