Garra rufa (doctor fish): 141343280
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Entry
141343280 CDS
T11039
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141343280 (ascc3)
Enzymes [BR:
grf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
141343280 (ascc3)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
141343280 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
141343280
NCBI-ProteinID:
XP_073703976
LinkDB
All DBs
Position
9:complement(46964068..47264024)
Genome browser
AA seq
2124 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQDDLTQDIYDLKSKRLKRQEVFSRDGLTWQKIVQFFTQHLEK
KDQPAATQELKNFLQAAKQIVGTDYGQDTIECAGVFLFKTFHNKDQIGHEETRAIKQMFG
PFPASAAELSCAAVGRLVAQIGESQVDAFIQTQSSLKTVNRSSIFGRNIAFSFDTYVLDA
QDTLPWSEGTDTEQDMDFHSFLNNHVGERRAGGDRDDAYSAEELERRNADSSILREEVEK
YLNEGNMVSSSAEELSTSLFEMLASTRSDDELQNELFEFLGPQGFEMISKLLQSRSDIVD
SLLSIPLDSRHHFTSGKHKGMRDESTKPTYGCQVTIQSEQEKQMMKIYRKEEKKERKRER
RVDEGDTCENAFYFDPKELRVQREQALLTARSSPVLGRHRDYERIRYPHVYDSYAEAIKT
SAFVGGAKMLLPEGIRRENNKMYEEVEIPPNEPMPIGFEEKPVYISELDEIGQLVFKGMK
KLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVMVFVHARNSTVRTAMSLTE
MAKNRGELSFFQVDHGPDYGQCEKQVQRSRNKQMREMFPDGFGIHHAGMLRQDRTLMENM
FSRGYIKVLVCTATLAWGVNLPAHAVIIKGTNIYDAKRGALVDLGILDVMQIFGRAGRPQ
FDKYGEGTIITSHDKLSYYLTLLTQQNPIESQFQQSLADNLNAEIALGTVTNVDEAVRWL
SYTYLFVRMRANPLAYGINHKAYQMDPLLELYRKELVVESGRKLDKARMIRFDERTGYFA
STDLGRTASHFYIKYNTIETFNELFNAQKTEGDILSIVSKAEEFEQIKVRDEETEELEKM
LSNFCELPAAGGVENGYGKINILLQTYIGRGEVDSFSLISDLSYVAQNAARIVRALFEIA
LRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFSVLPPSVLSRMEERNLTVDKLRDMGKD
EIGHMLHHVNIGLKVKQCVHQIPAILMESSIQPITRTVLRVRLSITPDFRWNDQVHGSVG
EPWWLWVEDPINDHIYHSEYFLLHKKQVVSGEPQQVVFTIPIFEPMPSQYYIRAVSDRWL
GSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGNREFESLYKFTHFNPIQTQIFHT
LYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPTSKVVYIAPLKALVRERIEDWKIRIE
EKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVAILIIDEIHL
LGEDRGPVLEVIVSRTNFISSHTSKQVRVVGLSTALANARDLADWLGIKQAGLFNFRPSV
RPVPLEVHIHGFPGQHYCPRMASMNKPVFQAIRTHSPAKPVLIFVSSRRQTRLTALDLIA
FLATEDDPKQWLHQDEREMDDIIGTVRESNLKLTLAFGIGMHHAGLHERDRKTVEELFVN
CKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVDYPITDVLQMMGRAGRPQFDD
QGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIAAGTITSKQDAMDYITWT
YFFRRLVMNPSYYNLDDINHETINKYLSNLVERSLRDLECSYCMEIQEDEHTIEPLTYGR
IASYYYLKHQTIRTFKERLKPELPIQELLAILSEAEEYAELPVRHNEDQLNSELAQRLPL
QVNPHSYDSAHTKTHLLMQAHFSRAQLPCSDYGTDTKTVLDNAIRICQAMLDVVANEGWL
VSTLSICNLVQMIIQARWLHDSSLLALPHIEKQDLYVFRRWSAKGARGGGGYRGPIEGLP
ELMAACDGKEDNFTSMVKEVLQPNQISQAWAFLSHLPVVEVRMSVKGWWDGCEEQTERVI
PANVTNIRDESSWLPLHADQEYVLQVSLRRLNAGHQRRKQDSKAQAPHFPKPKDEGWFLV
LGEVEKKELLAIKRVGYIRNHSSVSVAFYTPEKTGKCIYTLYLMSDSYLGLDQQYDIHLN
VIPASIAAQVNSEISDSVGKMALK
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccctcggctcactggagccctgcgctccttttctactgtcagcaaacaggat
gatttaacacaagacatttatgatctgaagagtaagcgcctgaaacggcaggaagtattt
tccagagatggtctgacatggcagaagatagttcagttcttcacccaacatctagagaag
aaagatcagccagcggccactcaggaattgaagaatttcctccaagcagccaaacagatc
gttggtacggattatgggcaggacaccattgaatgtgctggagtcttcttgtttaaaacg
ttccacaacaaagatcagatcggtcacgaggaaaccagggccataaaacagatgtttgga
ccttttccggcctctgccgctgagttgtcttgtgcagctgtgggtcgtttagtggcccag
attggagaatctcaggtggatgcttttatccaaacacagagttctctcaagacagtgaac
cgtagttctatctttggacggaacattgccttctcatttgacacatatgtgctggatgct
caagatactctgccctggtcagaggggactgatacggagcaagacatggactttcacagc
ttcctcaataatcatgttggtgagcggagggctgggggtgacagagatgatgcttactca
gcggaagaactggagcggagaaatgcagacagctccatcctgagagaagaggtggagaaa
tacctaaacgagggaaatatggtatcgtccagtgccgaagagctctccacctctcttttt
gagatgcttgcctccacaaggagtgatgacgaactacaaaacgagctgtttgagtttcta
ggtcctcaggggtttgagatgatctccaaactcctccagagtaggtcagacattgtggac
tccctgttgtctattccgttggatagcagacatcacttcacatcaggaaagcataaaggg
atgagagatgaatccaccaaaccaacatacggctgccaggtgaccatccagtctgaacag
gagaagcagatgatgaagatttacagaaaagaggagaagaaggagaggaaacgtgagaga
cgagtagatgaaggggatacctgtgaaaacgctttttattttgaccccaaggaattgaga
gtgcagagggagcaggccttgctgactgcacgcagttctccagtgttaggccggcacaga
gattacgaacgcatccgttaccctcacgtttatgattcttacgccgaagccatcaagacc
tcagcattcgtcggaggagccaagatgctgctgcctgaggggatcagaagagagaataat
aagatgtatgaggaggttgagatcccgcccaacgaacccatgcccattggctttgaagag
aaacccgtgtacatctcggagctggacgagattggccagttggtgttcaagggcatgaag
aagttgaacagaattcagtctatagtgttcgagacggcttacaataccaatgaaaacctg
ctcatctgcgcccccaccggtgccggcaaaaccaacatcgccatgctcaccgtcctccac
gagatccgccaacacctgcagcctgggggagtcatccgcaaggatcagtttaagattgta
tacgtggctccgatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctctgggcatcgctgtcaaagagctgacgggagacatgcagctgaccaaaggagaa
atcctccgcactcagatgttggtgacgactccagagaagtgggatgtggtgaccaggaag
agtgtgggggacgtggctttgtctcagatcgtccgactgctcatcctggatgaagttcat
cttcttcatgaggatagagggccagttctggagagcctggtggcccggacgctgcgtcag
gtgatggtgtttgtacatgctcgcaactccaccgtccgcaccgccatgagtctgaccgag
atggccaagaaccgaggagagctgtcgttctttcaggtcgaccacggtccagactacggc
cagtgtgagaaacaggtgcagcgctccagaaacaagcagatgagggagatgtttcctgac
gggttcggtatccatcacgccggaatgttacggcaggaccgcacgctcatggagaacatg
ttttccagaggatacataaaggttctggtgtgcactgccacgctggcctggggtgttaac
ttaccggctcacgcggtcatcatcaagggcaccaatatctatgatgccaagcgtggtgca
ctggtggatttgggcatcctggacgtgatgcagatcttcggtcgggctggacggccacag
tttgataagtatggtgaaggaaccatcatcacgtcccatgataagctgagctactacctg
acgctcctgactcagcagaaccccatcgagagccagttccagcaaagtctcgctgacaac
cttaacgccgagatagctctagggacggtcactaatgtcgatgaagccgtccggtggctg
agctacacgtacctgtttgtgcgaatgagagccaatccactcgcttacgggatcaatcac
aaggcctatcagatggacccattgttggagctctacaggaaggagttagtcgtggagtcc
ggcaggaagctggataaggcacggatgatccgttttgatgagagaactggttattttgca
tccaccgaccttggcaggacagctagtcacttctacataaagtacaacaccattgagaca
ttcaatgagcttttcaatgcacagaagactgaaggagatattctgagcattgtttcgaaa
gctgaggaatttgagcagatcaaggttcgggacgaggagacggaggaacttgaaaaaatg
ttgtctaatttctgtgagctgccggcagccggaggagtggagaatggctacggcaagata
aacatcctcctccagacgtacatcggccgcggggaggtggacagcttctccctcatatct
gacctgtcttatgtagcgcagaatgctgctcgtatcgtgcgggctctgtttgagatcgct
ctgaggaagcgctggccggccatgacctaccgcctgctgaacctgtgtaaagtgattgac
aagcgtctgtggggctgggcccacccgctgcgacagttcagcgtgctgcccccttcggtg
ctgtccagaatggaggagaggaacctcactgtggacaaactcagagacatgggcaaagat
gagatcggtcacatgttgcatcacgtgaacatcgggctgaaggtgaagcagtgtgtgcat
cagatacccgccatcctcatggagtccagcattcagccaatcacacgcaccgtcctgcgc
gttcgcctcagcatcaccccggacttcaggtggaatgaccaggtccatggctcagtggga
gagccctggtggttatgggtggaggatccgatcaacgaccacatctaccactctgagtat
ttccttctgcataaaaaacaggttgtgagtggagagccacagcaggtggtcttcactata
cccatctttgagcccatgccttctcaatattacatccgagctgtgtctgaccgctggctg
ggctctgaagctgtgtgtatcatcaacttccagcatctcatcctgcctgaaagacacccg
ccacacacagagctcttggatcttcagccattgcctgtgaccgcgttgggaaaccgggag
tttgagagtctatacaagtttacacactttaatcccattcagacgcaaatcttccataca
ctgtaccacacagataccaacgtcctgctgggggcccccaccggctccggcaaaaccatt
gctgcggagatggccatcttcagagtcttcaacaagtaccccacctccaaggtggtctac
attgctcctcttaaagctctggtccgagagaggattgaggactggaagatcagaatagaa
gagaaacttgggaggaaggtggttgagttaacaggcgatgttactccagacatgcgagcc
atcgcgcaggcggacctgatcgtcactaccccggagaaatgggatggtgtcagtcgcagc
tggcagaaccgcagctatgtgcagaaagtggctattctcatcatagacgaaatccatctt
ctaggcgaggacagaggaccagttctagaggttattgtgtccagaaccaactttatctca
tcgcacacctcaaaacaagtgcgagtagtgggactctctaccgcgctggctaatgcacgg
gatctagccgactggctgggcatcaaacaggcgggactgtttaatttccggccctctgtt
cgcccagtgccattggaggttcacattcacggatttccggggcaacattattgccctcgt
atggccagcatgaacaaaccagtcttccaagccatccgcacacattctcctgccaaaccg
gtcctcatatttgtgtcatcgcgccggcagacacggctcacggctctggacctcatcgca
tttctggctacagaagatgaccccaaacagtggctccaccaggatgagagagagatggac
gatatcatcggcactgtaagggagtcaaatctgaaactgaccctggcgtttgggatcggg
atgcatcacgctggtcttcacgagagagacagaaagacagtggaagagctctttgtcaac
tgtaaaatccaggtgttaattgcgactagcacactagcatggggcgtcaacttccctgct
cacctggtgatcgtgaagggcacagaatactatgacggaaagactcgccgctacgtggat
taccccataacagatgttcttcagatgatggggcgagcaggacgaccgcagttcgatgac
cagggcaaggctgttatccttgtgcacgacattaagaaggacttctataagaagttcttg
tacgagccgttccccgtggagtcgagtcttctgagcgtgctgtccgaccacttgaatgca
gaaatcgcagcgggcacaatcacctcaaaacaagacgccatggattacatcacatggacg
tacttcttccgcaggctggtcatgaacccaagttactataatttggatgacatcaaccat
gaaaccattaacaaatacctttctaacctggtggagaggagtctgagggatctggaatgt
tcctactgcatggaaatacaggaggacgagcacaccatcgagccgctgacgtacggccgc
atcgcatcctactattacctgaaacaccagaccatccgcacgttcaaagagcgtctgaaa
ccagagctgcccatccaagagcttctggccatcctgtcggaagcagaggagtacgccgag
ctccccgtacgccacaacgaggaccaactgaacagcgagctggcccagcggctccccctg
caggtcaaccctcactcgtatgacagcgcacacaccaaaacacacctgctcatgcaggcc
cacttcagccgggcacagctgccctgcagcgactacggaaccgacaccaaaactgtgctg
gacaacgccatccgcatctgccaggctatgctggatgtggtggcgaatgaaggatggcta
gtgtctacactgagcatttgcaaccttgtacagatgatcattcaggccaggtggcttcac
gattcctccctgctcgcacttcctcacattgaaaagcaggatctctatgtcttcaggagg
tggagcgccaaaggtgcgaggggcggaggtggctatcgaggcccaatcgaggggcttccc
gagctaatggccgcctgcgacgggaaagaggacaacttcacgtcgatggtgaaggaggtg
ctgcagcccaatcagatctctcaggcgtgggcttttctgagtcacctgcctgtggtggag
gtcaggatgagtgttaagggctggtgggacggttgtgaggagcaaactgagcgtgtgatc
cctgctaacgtcaccaacatcagggatgagtccagctggctgccgctgcacgccgaccag
gagtatgtcctacaggtgtccctgcgccgcctcaacgccggccaccaaagaaggaagcag
gacagcaaggcacaggcgccacacttccccaaacccaaagacgaaggctggtttcttgtt
ctcggggaggttgagaagaaagaactgctggctatcaaacgtgtgggatacatacgtaac
cacagcagtgtgtccgtggccttctatacacctgagaagacgggaaagtgtatctacacg
ctgtacctgatgagcgacagctacctcggtctggatcaacagtacgacatccacctgaac
gtcatcccagccagcattgctgcacaagtcaacagtgagatatcagatagtgtaggtaaa
atggctctgaagtaa
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