Garra rufa (doctor fish): 141344615
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Entry
141344615 CDS
T11039
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141344615
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141344615
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141344615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_I
Laminin_G_2
Laminin_II
Laminin_G_1
EGF_laminin
EGF_LMN_ATRN
BORCS6
IL4
Laminin_G_3
DUF1059
Motif
Other DBs
NCBI-GeneID:
141344615
NCBI-ProteinID:
XP_073705589
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All DBs
Position
10:complement(48729341..48751780)
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AA seq
1377 aa
AA seq
DB search
MSPRLGRCTPSLRRAHLSTASYFTRIERTGMSGSIARRSAALRALAFGALLALVSGGPRP
EHRSEQQQREQAEWTQRLQYPGENDAQRVQFPSLHDTQRVQFPSIDDPQRCAAGQYLDRS
GLVSRCVRCSCNGFSDECEDNTGRCLNCRDNRAGDNCERCKDGHYSSTAKGRCSACPCPL
TNHANNFALGCTETDGRHVCLCQDGYTGERCERCAPGYYGDPLVYGGSCRLCKCPGNLCD
SKTGVCRNSLVLRDTNTEEQCEECDNCAQTLLKDLEKLDIELRRIKDQVDFDSLRPSSKE
HMRKLEEAITATTNLVNTYSLTVDNQVPKINQLAQDVVNLSEDMDNLKEQVRKRSEDSQK
AVANAENSHQRAKDLDTETQNLLRKIQELLKQLMDSNSSGSALPNADLAKLLRQSENMVK
EMQKRSFTTPKEAAKKEQAEANKFLENVKNIIKQCDENEAASKRVDNLLSDYEAKMKELE
DLLKQAEKMVKKADNQNDVNAEGLKDILKRVKDVERERNLVQDQIVLAVDQLKETEDMLK
MFSDSKKEYEQLATQLNGAKGELKDKVRTISQAAAKEKIVKQAEEHAENMHKLAKELQDA
VQNVSGRSGVQTALSGIEAYKNITDAVNAAEEAAKKAKEAADKALNDVSKGDLINRAKNL
KNDGNNLLKEAKNAAKDLKGATKDLSDQKERLQTAEEKKKALEKELNAIQEGLKGIQRDD
IGNIIDAAKKAAAAANRSTSDTMDQLNNIKAEVTKISISPSVSNMDSVLNNVEMTVKNLS
SSVPSLLDKIEEINSQISAGNNVTDNINQIKELIEQAREAANRIVVPMKFTGKGHVELRS
PQDIDDLRAYTTLSLSLQRPEKPLNRGDEIRRRRRQIAEDNLFVMYLGNKDASGDYIGMA
LRSNILHVIYKLNGEEYDIEASSITESSSDVAFFDKVDLYRIYQDAQVIQTKQFTSINPK
PPQLKENLGQLTRNLLDLSPEKVVFYVGGYPDDFKPPASLNYGKYKGCIEISTFNDKFIS
LYNFKNAVNINLETPCKRQIPLTISESDYYEGTGYAKILLEKFPNNLQIAQKMETRTKDA
LLLYFGDENNDFFYSVTLENGYVVLRGQNNDTILDPVRSQDKATFPQETDVKVWIIRGRE
FKVRVGNTEVKRSDVIPQMFNYYYIGGIPNNLRERYNITTPALKGCVKIGTAAGSTPSIE
EKVGVGRGCTNELLMVRKAEFSQGSALEKLYEDFSLDIVSLSLGFKSTKPDSILLQNSKN
NKNIELSMENGYVLLKFQGSIWKSTKQYQDGEWHYLTVSGQGQRLELRIDEEDVGQKVTG
SSSELYSPSVTLGKDTFKGCISNLYLRRPASLYRAEDLSSYSSTGDVLLNTCSAIRK
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgagccctcgtctggggcgttgcactccctctttaagaagagcgcacctgagcacagcc
agttatttcacacgaatcgagcgaacgggaatgtcaggatcaatagcgcggaggagtgca
gcactcagggcccttgcgttcggggctctgctagcgctggtttctggaggacccagaccc
gaacacaggagcgagcagcagcagagagaacaggcagaatggactcagagacttcagtat
ccaggggaaaacgatgctcagcgcgtccagtttccttcccttcatgatacacaacgcgtt
cagttcccttcaattgacgatccacagagatgtgctgctggtcaatatctggacagaagt
ggtctggtttctcgttgtgtccgctgttcttgtaacggcttctctgatgagtgtgaggac
aacaccggccgatgtctgaactgccgtgataatagagcaggagataactgtgagcgctgt
aaagatggacattactctagcacagctaaggggagatgcagcgcatgcccatgtcctctc
accaaccacgccaacaattttgcattgggctgcactgaaaccgatggcagacatgtgtgt
ctgtgtcaagatggttacacaggtgaaagatgcgagcgatgtgctccaggatattatggc
gatcctctggtctatggaggaagctgtcgtctttgcaaatgtcctggaaacctgtgtgac
tctaagactggagtgtgcaggaattctctggtgctccgagacacaaatacagaagagcag
tgtgaagagtgtgataactgtgcacagacattactgaaagatctggagaagcttgatatt
gagctcagaagaattaaagatcaagtcgatttcgactctctcagaccttcatcaaaagaa
cacatgaggaagcttgaagaagccattactgccacaacgaatctggtgaacacatacagc
ctcactgttgacaaccaggtgcctaaaattaaccagctggcacaagatgttgttaatctg
tctgaagatatggacaatctaaaagagcaggtcagaaagcgatctgaggattctcagaaa
gctgttgctaatgctgaaaacagccaccaaagagcaaaagacctggacaccgagacacag
aacctcctcagaaaaatacaagagcttctaaagcagctgatggactcaaacagcagtgga
tcagctttgcccaacgccgatctagccaaactcctgaggcagtctgagaacatggtgaag
gagatgcaaaagcgaagcttcaccacgccaaaagaagcagctaagaaagagcaagctgaa
gcaaataaatttcttgagaatgttaaaaacatcataaagcagtgcgatgagaatgaggcg
gcgtccaagcgcgtcgacaatctactgagcgactatgaggccaaaatgaaagagttagag
gatttgctcaaacaggctgaaaagatggtgaagaaagccgacaatcagaatgacgtcaac
gctgaaggccttaaagatattctgaaacgagtgaaagatgtggagcgtgagagaaacctt
gtccaggatcagattgttcttgcagtcgatcagctaaaagagactgaggatatgctgaaa
atgttcagcgacagcaaaaaggaatacgaacagcttgcaacgcagctcaacggagcaaag
ggtgaactcaaggataaagtccgaaccatctcacaagcggcagccaaagagaagatagtg
aaacaggcagaagaacatgcggaaaacatgcacaaactggccaaagagctgcaggatgct
gtacagaatgtgagtgggcgctctggtgtgcaaaccgctctctctgggatagaggcgtac
aaaaacatcacagacgctgtcaacgctgcagaggaggcggcgaagaaggccaaagaggcg
gcagacaaagcgctcaatgatgtcagtaaaggggacttaatcaacagagcaaaaaacctg
aaaaacgatggcaataacctacttaaagaggccaaaaatgcagctaaagatcttaaagga
gcaactaaagacctcagtgatcagaaggaacgcctgcaaactgccgaggagaaaaagaag
gcactggaaaaggagttgaacgctattcaggagggtttgaaaggaattcagagagatgac
attggtaatattatcgacgcggctaagaaagcggcagcggcggccaatcgctccacgagt
gacacaatggaccagttaaacaacatcaaagcagaagttaccaagatctccatcagtcct
tctgtttctaatatggacagtgttctcaacaatgtggaaatgaccgtcaaaaatctgagc
agctccgttccatccctgctggataaaatagaagaaatcaattctcagattagcgctgga
aacaacgtgactgataatattaatcagataaaggagctgattgaacaagcgcgagaggct
gctaacagaattgttgtgcctatgaagttcaccggtaaaggacacgtagagctgcgttca
ccacaagacatagacgacctgcgggcatacaccactctctccctgtccctccagagaccc
gagaaacccctcaatcggggcgatgagatcagacggcgccggcgtcagatagctgaagac
aatctgttcgtgatgtacctcggaaacaaagacgcatccggagactacatcggcatggct
cttcgcagtaacatcctgcatgtcatttataagcttaatggagaggagtatgatattgag
gcatccagcatcactgagtcttcatctgacgtggctttcttcgacaaagtcgacctttac
agaatttatcaagatgcgcaagtcattcaaacaaagcagttcacctcaatcaatccaaag
cctccgcagctgaaagaaaacctgggtcaactgacgcgcaacctgctggatctcagtcca
gagaaagtggtcttctatgtcggaggttatccagatgacttcaaaccaccagcctctctc
aactatggaaaatacaaaggctgtattgagatttccaccttcaatgacaaattcatcagt
ctgtacaactttaagaacgcggttaatattaacttggaaactccttgcaagagacaaatc
cctctaacaatctcagagtcagattactatgaaggcactggttatgccaaaatcctgctt
gaaaaattccccaacaatctgcagatcgctcagaaaatggaaacgagaactaaggatgct
cttttgctgtatttcggagacgagaacaatgactttttctacagtgtgactcttgagaat
ggttacgttgttctgcgtggccaaaacaatgatactattttagaccctgtcagaagtcaa
gataaggcaacctttcctcaggaaacagatgtgaaagtttggattattagaggaagagag
tttaaagtccgagtggggaacaccgaggtcaaaagatcggacgtcattccacaaatgttc
aattactattacatcggcgggatacccaacaatttgcgtgaaagatacaacatcactacc
ccagctctgaaaggctgtgtgaaaatcggcacagccgccggctccaccccgagcatcgaa
gagaaagtgggcgtcggcagaggatgcaccaatgagctactgatggtcaggaaggctgaa
ttcagccaaggtagtgcattggagaaactctatgaagacttcagcttagacattgtcagt
ctttcactgggcttcaagagtacgaaaccagacagcatcctgctgcagaacagcaaaaat
aataaaaacatcgagctgtccatggagaacggatatgtgctcctgaaattccaaggcagc
atctggaaatctactaagcagtatcaggatggtgaatggcattatctcactgtttccgga
cagggccaacgccttgagcttcgaatcgatgaagaagatgttggccagaaagtgacggga
tcttcatctgaactttattcacccagtgtaaccctgggcaaagacacattcaagggctgc
atctccaacctttatctgagaagacctgcttctctgtacagagcggaggatctgagctct
tactcgtccacaggagacgtgctgttgaacacatgcagcgccatacgcaagtag
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integrated database retrieval system
