Garra rufa (doctor fish): 141347717
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Entry
141347717 CDS
T11039
Symbol
kalrnb
Name
(RefSeq) kalirin RhoGEF kinase b isoform X1
KO
K15048
kalirin [EC:
2.7.11.1
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141347717 (kalrnb)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141347717 (kalrnb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141347717 (kalrnb)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
141347717 (kalrnb)
Protein kinases [BR:
grf01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
141347717 (kalrnb)
Membrane trafficking [BR:
grf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
141347717 (kalrnb)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141347717 (kalrnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_6
Spectrin
SH3_KALRN
SH3-RhoG_link
PH
CRAL_TRIO_2
SH3_1
IQ_SEC7_PH
PH_10
PH_19
SH3_2
SH3_9
Spectrin_SESTD1
CRAL_TRIO
RHG20_PH
YkyA
YpoC
DUF3300
Motif
Other DBs
NCBI-GeneID:
141347717
NCBI-ProteinID:
XP_073708786
LinkDB
All DBs
Position
12:10004542..10146065
Genome browser
AA seq
2314 aa
AA seq
DB search
MMNSAEAAEEGPNDPDTEPFFKTVPSFSSGSLRNDGIKAADVLTVLREKVAFVSGGRDKR
GGPILTFPARSNHDRIKQEDLRKLVTYLSTVPSEDVSKRGFTVIVDMRGSKWDLIKPLLK
TLQESFPAEICVALIIKPDNFWQKQKTNFGSAKFTFETSMVSVEGLTKLVDPSQLTADLE
GTLEYDHVEWTELRVSLEEFTGGALHLLSRLEELQEVLSRQELATNAEEARKLLEEHARL
RKTMTKAPVDELDHEGQRLLQKIRDGGDGRLSGGADFQSLVPKISALLDKLQVTRQHLLQ
AWHNRKQQLDQCFQLRLYEQDAEKMFEWIGHNKELFLQTHTDIGVSYQHAADLQTQHDHF
AMNSMNAYVNISRIVSVATRLCEASHYASAQIQQISGQLDQDWKSFASALEERSAILAMS
SVFHQKSEQFLSSMEGWVKSCGEGGLPTATQELEMAIHNHQNLYEQVTTAYTEVSQKGKT
LLDVLQRPQPPADSGSLTAGADYSQAVRGVLEVVHEVVHQYRRLEGLLQHRKLRLHQRLQ
LCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSVHRARALQKRHDDFQEVAQNTYTNADKL
LEAAEQLAQTGECDPEEIYAAAHHLEVRVQEFVRRVEQRKLLLDISVSFHTHTKELWSWM
EDLQKTLVEPVVNSESVDAVQELIRLFQQQQSSTLDATLNVIKEGEELIQHLRDSALACN
KLPHASSVAHIEGVLQQLDEAQAHMEELFHERRIKLDIFLQLRIFEQYALEVMGELDAWK
QDLMRQATDFNTEELTLAEQRLHRHTERKLAMNNMTYEVIQQGQDLHQYIMEVQASGMEI
TGEKDVDLAAKVQELLEFLNEKQHELEVSAEHTHKRLEQCLQLRHLQAEVKQVLGWIRNG
ESMLTANTTNAGSLSEAEQLQREHEQFQLAIESLLHADSLQRTHQSALQLQQRAELMLQA
GHYDPDAVRACAETVALHWQTLMLKMEDRLKLVNASVAFYKTSEQVCNVLESLELEYRRE
EDWCGGHDKLGSTAETDHVSPLINKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMPG
VAIHNRATESQVKAILSELLQRENRVLHFWTMKKRRLDQCQQYVLFERHAKQAIGWLQET
GEYFLSTHTSLGDSSEKTQELLKEYEDFRISAKQTQEKVKLLIQLAGSLVEKGHVHVTEL
KRWVSTVDRRYRDFSMRMGQYRCNLDRALGVCSEDNKDLELDIIPANLTHTDPEVNLNDP
DHEVNEEKKKSARKKEYIMAELLQTERAYVRDLQECLETFLWEMTSGAEIPSGIANKEHV
IFGNIQEIYEFHNNIFLKELENYEQLPEDVGHCFVTWADKFHIYVTYCKNKPDSSQLIQG
QAGRFFDEIQRRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGEIKEGLEVMLS
VPKRANDAMHVSMLEGFDENLAVQGELILQDTFQVWDPKSLIRKGRDRHLFLFEISLVFS
KEMKDSSGRTKYVYKNKLLTSELGVTEHIEGDPCKFALWAGRTPTSDNKTVLKASSIEVK
QEWIRNIREVIQERTVHLKGALKEPIHPPKTPARQRSISKRETTEDADSQGDASSQPDTI
SIASRTSQNTVDSDKLSGGCEQTVVLQDFVAGSVGELSVQSGQTVELLERSGERPGWCLV
RTTEHSPPQEGLVPSSTLSVSHSRSSVDMDCFFPPGKENYPVGSSEVKSESAASLQPQPS
VTSLPTGSPGPKRSGTTGNTLKKWLTSPVRRLSHGKGDNANAKKPNNKQRKRDGRKSVEL
GPPHQDSTEERGRRGANSGGEEEAEDEPHTPLPPPMEIIKDSSAQEEKTPEPGSFPVLGS
VTPSDQTPRDPETEQKNKAMRGRMFVLNEMVQTERDYVKDLGVIVEGFMRRIGEKGVPEE
MTGKDKIVFGNIHQIYDWHKEFFLGELEKCLQDHDRLAELFIKHERRLHMYVIYCQNKPR
SEFVVAEYDGFFEEVQQEVNSRLSISDYLIKPIQRITKYQLLLKDFLKYSTKAGLDCKET
EKAVELMSLVPKQCNDMMNLGRLQGYEGKLTAQGKLLQQDTFFVTEQDSGVLSRSKERRV
FLFEQIVIFSELLRKGSSTPGYQFKKSIKVSYLSMEDNVESDPCKFVLSCRGSSERLTLQ
AANIDIKKEWVQSIRELLDMQINFLTALQNPQEYQKKESGGSLSRQLSNSSRSSSSIPST
PLKPNTAPNGSPAHKPNKHVEEELDEGECNGLSSVLVTQDYNAVKEDEICVVVGEKVQIL
ASNQQNMCLVYRPANSQSPAAEGWVPGHVLSSTR
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattctgccgaggcggctgaggagggaccgaacgatccagatacggagccgttt
ttcaaaacagttccgtctttctcatcaggatctcttaggaatgatggaataaaggcggct
gatgttctaacagttttaagagagaaggttgcctttgtctcaggaggacgagacaagaga
gggggacccatccttacattccctgcacggagtaatcatgacagaataaagcaagaggat
ttgcggaaactggtgacttacctctctactgtgcccagtgaggatgtaagtaaacgaggg
tttacagtgatcgtagacatgcggggctcgaagtgggatctaatcaagccgttgctgaag
acgctgcaggagtcatttccagctgagatctgcgtcgctctcattatcaagccagacaac
ttctggcagaagcagaagaccaactttggcagtgccaagtttacctttgagaccagtatg
gtttcagtggaaggtctgacgaagttggtggacccgtctcagctgacggcagatctggaa
gggaccctggagtacgaccacgtggaatggactgagctccgtgtttcccttgaggagttc
actggaggtgctttgcacctcctttctcggctggaagagcttcaagaagtgctttctcgc
caggagctggccactaacgcagaggaagcacggaaactcctggaggaacatgctcgactg
agaaagactatgacgaaggcaccggtggatgagttggaccatgaaggacagcgactcctt
cagaagatcagggatgggggagacgggaggctctctggtggggctgacttccagagtttg
gtacctaagatttccgccctgttggataaacttcaagttacgcggcagcacctgctacag
gcctggcacaaccgcaaacaacagctggaccagtgttttcagttacggctgtatgagcaa
gacgcagaaaagatgtttgaatggatcggacacaataaagagctgttcctgcagacgcac
acagacattggcgtgagctaccagcatgcagccgatcttcagacccagcatgaccacttt
gccatgaactctatgaatgcgtatgtcaatatctcgcgtatcgtctcggtggcgacgcgg
ctctgtgaggccagtcattatgcttccgctcaaatacagcagatctctggtcagctggat
caggactggaagagctttgcctcggcactggaggagcgcagtgccatcctggctatgtcc
tctgtgttccaccagaaatctgaacagtttctgtccagcatggagggatgggtgaagtcg
tgcggtgagggcggcttgccgacagcgacgcaagaacttgagatggccattcacaaccac
cagaatctgtacgagcaggtcaccacagcatatacggaggtcagtcagaaaggaaagaca
ctactggatgtgttgcaaaggcctcagccgccggccgactccgggtctctgacggcaggg
gccgactacagtcaagcggtgaggggggtactggaggtagtccatgaggtagttcatcag
tatcgcagactggagggtctcctgcaacaccgcaagctccggctgcaccagagacttcag
ctgtgtgtgtttcaacaagacgtacagcaggtcttggactggattgaaaaccatggagag
gcctttctcagtaaacacacaggagttgggaagtctgtgcacagagcacgagcactacaa
aaacggcatgatgactttcaggaggtggcacagaacacttatactaatgcggataagctt
ttggaggcagcggagcagctagctcagacgggagagtgtgatccagaagagatttacgct
gccgcccatcacctagaggtcagagttcaggagtttgtgcggagggtggagcagaggaaa
ctcctgctggatatctcagtgtcatttcacacccacacgaaagagctgtggtcgtggatg
gaggacttgcagaagactcttgtggagccggtggtgaactctgagtcagtggatgcagtt
caggagctgatcagactgtttcagcagcagcagagcagcactctggacgccacactcaat
gtcatcaaagaaggggaggagcttattcagcacctgcgggactcagcgctggcctgtaat
aagctgcctcatgccagctccgtggctcatatcgagggtgttcttcagcaattggatgag
gctcaggctcatatggaggagcttttccacgagcgcaggatcaaactggacatcttcctg
cagctccgtatctttgaacagtacgccttggaggtgatgggtgagctggatgcatggaag
caggatctgatgcgacaggcgactgattttaacacagaggaactcacgttggctgaacag
agattacacagacacacagagcgcaaactcgccatgaacaacatgacctatgaggttata
cagcagggacaggatcttcaccagtacatcatggaggtccaggcttcaggaatggaaatc
actggagaaaaagacgtcgacttggcggcaaaagttcaagagctgctggagttcctgaat
gaaaaacagcatgagctggaagtgagcgcagaacacacgcacaagcgtctggagcagtgc
cttcagctacgacacctgcaggccgaggtcaaacaggtgctgggttggatccgcaacggt
gaatccatgctcacggcaaacacaacaaatgctggttccctgtcagaggcggaacaactt
cagagagagcatgaacaatttcagcttgccatcgagtctctgctccacgccgactcgctc
cagcgcacccaccagagtgccctacagctccagcagagggcggagctgatgttgcaggcg
ggtcactatgacccagacgctgtccgggcctgtgccgaaaccgtggccttgcactggcag
acactcatgctgaagatggaggacagattaaagctggttaacgcctctgtggccttctac
aaaacatctgaacaggtatgtaatgtattggagagtctggaactggagtacaggagagag
gaggactggtgcggaggtcatgataaattgggctcaacggcagagactgaccacgtcagc
cctctcatcaacaaacacctggagcagaaagaagcttttctcaaggcgtgtactttagcg
cgtcgtaatgcggaggtctttcttaagtacatccatcgaaacaatgtgagcatgcctggg
gttgccatccacaatcgagccactgagtcccaagtcaaagccattctgagtgagctgcta
cagagggaaaaccgtgtccttcatttctggactatgaaaaaaagacgtttagatcaatgc
caacagtacgttctttttgaacgacatgccaaacaggccataggctggttacaggaaaca
ggagagtattttctatccacacacacatcgcttggtgattccagcgaaaaaactcaggaa
ctactaaaagagtatgaagattttcgcatatctgcaaagcaaacacaagagaaggtaaag
ctgttgatccagctggctggtagtttggttgagaaagggcatgtccatgtaactgagctc
aagaggtgggtgtctacagtagacagaaggtacagagatttctccatgcggatgggtcag
taccgctgcaacttggaccgagcgctgggagtgtgttctgaggacaataaagatctagaa
ctggacattatccctgccaacttgacccacactgatccagaggtcaacctcaacgatcct
gaccatgaagttaatgaggaaaagaagaaatctgccagaaagaaagagtatattatggct
gagctgctccagacagaaagagcttacgtacgagacctacaggagtgtttggagactttt
ctctgggaaatgacaagcggtgctgagatcccatctggaattgcgaacaaagagcatgtg
atcttcgggaatattcaggagatttatgaattccataacaacatctttctaaaagagctt
gaaaactatgagcagcttccagaagacgtgggccattgttttgtcacatgggctgataaa
ttccatatatacgtcacctactgcaaaaacaaaccagactccagtcaactcatccagggc
caggccggaaggttcttcgatgagatacagaggagacatggattagccaattcaatctca
tcatacctgattaaacccgttcagagaatcaccaaataccagctcttgttaaaggagttg
ctgacgtgttgtgaagaagggaaaggagaaataaaggagggtttggaggtgatgctcagt
gtgcctaaacgtgctaatgacgctatgcacgtcagcatgctggagggttttgatgaaaac
ctggctgtacagggtgagctgatcttacaggacaccttccaggtgtgggatcccaaatct
ctgatccgcaagggccgggaccggcatctcttcctctttgagatctctctcgttttcagt
aaagagatgaaagactcgtcgggacgcaccaaatatgtttacaagaacaagctgctgaca
tcagagttaggagtcaccgaacacattgaaggagatccatgtaaattcgctctgtgggcc
ggccggacgcctacatctgacaacaaaacggttctcaaggcctccagtatagaagtgaaa
caggagtggatccggaacatcagggaagtgattcaagagagaacggttcacctgaagggg
gcgctaaaggagcccatacaccctcctaaaaccccggccagacagcgcagcattagcaag
agggaaactactgaggacgcagacagtcagggtgatgccagcagccagccagacacaatc
tccatcgcttcccgcacctcccagaacactgtagacagtgacaagttgtcgggtggctgt
gagcagactgtggttctccaggactttgttgcgggatcggtgggtgagttgagcgttcag
tcgggtcagactgtcgagctgttggagaggtctggagagcggcccggctggtgtctggtg
cggaccaccgaacactcgccccctcaggagggtctggttcccagcagtaccctgtccgtg
tctcactcccgcagtagtgtcgacatggactgctttttcccacctgggaaagaaaactat
cctgtggggagttcagaggtcaaatctgagtccgccgcatcactgcagccgcagccatcg
gtgacctccttgccgaccggttctccaggacctaaacgctctggaactactggaaacacg
ttaaaaaaatggctcactagccccgtacgacgcctcagccacggcaaaggagacaacgct
aatgccaaaaaacccaacaacaagcaacgtaaacgagacggccgtaagagtgtagaactg
ggaccgccacaccaagacagcactgaagagagaggaagacgaggagcgaacagcggagga
gaggaagaggctgaagacgaaccacacacaccccttcctccacccatggagatcatcaaa
gactcctctgctcaggaggagaagactccagagcctggctctttcccagtgttgggtagc
gtcacgccgtctgatcagacgcccagagacccagaaacagagcagaagaacaaggccatg
agagggcgaatgtttgtgctaaatgaaatggtgcagacagagagggactatgtgaaggat
ctgggtgtcatagtagagggttttatgagaaggattggggaaaaaggtgttccggaagaa
atgacggggaaggataagatcgtattcgggaacattcatcaaatctacgactggcataaa
gagttcttcctcggtgaactagagaaatgtcttcaggaccacgacagattagctgagctg
tttatcaagcatgagagacggttacacatgtatgtcatctactgtcagaacaaaccccgc
tcagagtttgttgtggctgaatatgacggattttttgaggaggtgcagcaggaggtaaac
tccagactgtccatcagtgattacctgatcaaacccatccagaggatcaccaaataccag
ctcttgctcaaggacttcttgaagtacagcactaaagcaggtctggactgtaaagagaca
gagaaagcagttgagctgatgtccctggtgcccaaacaatgtaacgacatgatgaatctt
ggacgattgcagggctacgaggggaagttgacagctcagggaaagttattgcagcaggac
acgttcttcgtgacagagcaggactctggcgtcctgtcccgcagtaaagagcgcagagtg
ttcctcttcgaacagatcgtcatcttcagcgagctgcttcggaaaggctcgtcaacacca
gggtaccagtttaaaaagagcatcaaggtgagctacctgagcatggaggacaatgtggag
agcgacccctgtaagtttgtgctgtcatgtcgtggctcatctgaacgactgacgctacag
gctgcaaacattgacatcaagaaagagtgggtccaaagcatccgagaactgctagacatg
cagatcaactttcttacagctctccagaatccacaggagtaccagaagaaagagagtgga
ggttctttgagcagacagctatctaatagcagccgttcctcatcctctattccctccacc
ccactcaaaccaaacaccgcccccaatggaagccccgctcacaagcctaataaacatgta
gaggaggagctggacgagggggagtgtaacggtctgtcatcggtgctagtaacgcaggat
tacaatgccgtgaaggaggacgagatctgtgtggtggttggtgaaaaggtacagatcctg
gcgtccaatcagcagaacatgtgcctggtttatcgacctgcaaacagccaatcacctgct
gcagagggctgggtaccgggtcacgtgctatcctcgacccggtaa
DBGET
integrated database retrieval system
