Gemella sanguinis: FOC50_07770
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Entry
FOC50_07770 CDS
T06314
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gsa
Gemella sanguinis
Pathway
gsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOC50_07770 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsa03021
]
FOC50_07770 (rpoB)
03400 DNA repair and recombination proteins [BR:
gsa03400
]
FOC50_07770 (rpoB)
Enzymes [BR:
gsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOC50_07770 (rpoB)
Transcription machinery [BR:
gsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOC50_07770 (rpoB)
DNA repair and recombination proteins [BR:
gsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOC50_07770 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QGS08166
UniProt:
A0ABX6FKV0
LinkDB
All DBs
Position
1622823..1626632
Genome browser
AA seq
1269 aa
AA seq
DB search
MQKVKFGKHRERRSYARISEVIDLPDLIEIQTLSYEKFLETGLKDVFRDVSPIEGNNDKL
SLEFIDYKLGTPKYNVDESKERDATYSAPLRVRVRLINKERDEIKEQEVFMGELPLMTET
GTFIINGAERVIVSQLVRSPSVYFTEDDKLKVKNIPNAYKTTVIPNRGAWLEFEKDIKGL
VYARIDRTRKIPLTTLIRALGFESDESIVKLFGEDTELLNTLEKDENLDTGTALKVIYDK
LRPGEPANVETAKATLYGRFFDPRRYDLAKVGRYKLNNKLHVGERLENQILVEPIVDTET
GEILVEKGTKLTREIIDEIYEELGTSANVVEFEMNESLDGSDSLKLQLFKVVNQVKVGND
FNVDELLEDQVLHIIGNGAPNKDILTLTIADIVASINYYLLLIRNRRNSDGFEYELIGRV
DDIDHLGNRRLRCIGELLQNQIRVGISRMERVVRERMSIQDTNEITPQQLINVRPVTAII
KEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIE
TPEGPNIGLINSLSSFARINEFGFIMTPYRKVEVDAEGRPYVTENVQYLTADQEDKYVVA
QSNSNVDEKGYFLDDEVVCRFRGDNTVKPREMMNYMDVSPKQVVSAATACIPFLENDDSN
RALMGANMQRQAVPLMVTEAPFVGTGMEHLAARDSGAAVIAKYPGIVEYVDGAKIKVRRI
ETLDGKEIEGDLDTYVIHKFVRSNHSTSYNQKPIVKVGDRVEKKDILADGPSMDKGELAL
GKNLVVAFVNWDGYNYEDAVIMSERLVKDDVYTSIHVEEYETDARDTKLGPEEITREIPN
VGENALRNLDSRGIIRIGAEVKDGDILVGKVTPKGLTEQTPEEKLLYAIFGAKSKEVRDT
SLRVPHGADGVVADVKIFKREDGAELANGVNELVRVFIIQKRKIRVGDKMAGRHGNKGVI
SNILPEEDMPYLPDGTPVDVMLNPLGVPSRMNIGQVLELHLGMAAKQLGIHVATPVFDGA
SDDDVWSTVAEAGMAKDAKTVLYDGRTGEPFDSRVSVGVMYMIKLSHMVDDKLHARSIGP
YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTYKSDDTNGRVKTYEAIVK
GENIPRPGVPESFRVLMKELQALGMDFRVMDKDDNEVDMGDIDLGDTIEFHGHHESEGHK
EEVEETQDVTSESGDYSSLANMITSTDSEEVVEESDDSNSGYASLASLLLSDTDDYADVE
DIDDEVDEE
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaagttaaatttggtaagcacagagaaagacgtagctatgctagaatatcagag
gtaattgatttacctgacttaattgaaattcagacattatcttatgaaaaatttttagaa
actggtcttaaagacgtttttagagatgtttcgccaatagaaggtaataatgataaatta
agtttagaattcatagactataaattagggactcctaaatataatgtagatgaatctaaa
gagcgcgatgctacatattcagcacctttaagagtgcgtgtccgtttgataaataaagaa
cgagatgagattaaagaacaagaagtatttatgggtgaattaccattaatgacagagaca
ggaacgtttatcattaatggagctgaacgtgtaattgtatctcaattagtacgttcacct
tctgtttactttacagaagatgataagcttaaagtgaagaatatccctaatgcgtataaa
acaactgttattcctaatagaggagcttggttggaatttgaaaaagatattaagggatta
gtttatgctcgcatagacagaactagaaaaatacctttaacaacgctaattagagcacta
ggttttgaatctgatgaatcaattgttaaattgttcggagaagatacagaactattaaac
actttagaaaaagatgaaaatcttgatacaggaacagcgttaaaagtaatttatgataaa
ttacgtcctggagaaccagctaacgttgaaactgcaaaagcgactttatatggaagattc
ttcgatccaagaagatatgatcttgctaaagtaggtagatataaacttaataataaactt
catgttggagaacgtttagaaaaccaaattttagtagaaccaattgttgatacagaaact
ggagaaattttagtagaaaaaggtactaaattaactcgtgaaattatagatgaaatttat
gaagaactaggaacttcagctaacgtagttgagtttgaaatgaacgaaagtcttgatgga
agtgacagcctaaaattacaattgtttaaggttgtaaatcaagtaaaagttggtaatgat
tttaatgttgatgaattattagaagatcaagttttacatataataggaaatggcgctcca
aataaagatatcttaacattaactattgcagatatagtcgcaagtattaactactattta
ctattaataagaaatagaagaaatagtgatggatttgagtatgagttaataggtcgtgtt
gacgatattgatcaccttggtaaccgtcgtttacgttgtattggagaattacttcaaaac
caaattcgtgtagggatttctcgtatggaacgtgttgttcgtgaacgtatgagtattcaa
gatactaatgaaataactccacaacaacttattaatgtaagacctgttacagctattatt
aaagaattctttggaagttctcaactttctcaatttatggaccaaacaaacccattgagt
gagcttacacataaacgtcgtttatctgcacttgggccaggtggtctaacaagagaacgt
gctggaatggaagtacgtgacgttcactattctcactatggacgtatgtgtcctattgaa
actccagagggaccaaacattggtctaattaactcattatcttcttttgcaagaataaat
gagtttggatttataatgactccttatagaaaagtagaagttgatgctgaaggtcgtcca
tatgtaactgaaaatgtacaatatttaactgccgatcaagaagataaatatgtggtagcg
caatctaactcaaatgttgatgaaaaaggatatttcctggatgatgaagttgtttgtcgt
tttagaggagataatacagttaagcctcgtgaaatgatgaattatatggatgtttctcct
aagcaagtagtttctgcagcaacagcatgtattccattcttagaaaatgacgactcaaac
cgtgcattaatgggtgcgaacatgcaacgtcaagcagtacctctaatggtaacagaagct
ccatttgttggaaccggaatggaacacttagctgctcgtgattcaggagctgcagtaatt
gctaaatatcctggtatcgttgaatatgttgatggagcaaaaatcaaagttcgacgtata
gaaacattagatggtaaagaaattgagggagatttagatacttatgtaatacataagttt
gttcgttcaaaccacagtacatcatataaccaaaaaccaattgttaaagttggagataga
gttgaaaagaaagatatacttgcagacggaccttcaatggacaaaggggaattagcatta
ggtaaaaacttagttgttgcattcgtaaactgggatggatataactatgaggatgctgtt
attatgagtgaacgtctagtaaaagatgatgtttacacttctattcatgtagaagaatat
gaaacagatgctcgtgatacgaagttagggcctgaagaaatcacacgcgaaatcccaaat
gttggagaaaatgcgttacgaaacttagattctcgtggtattattcgtataggtgctgaa
gtaaaagatggtgatatcttagtaggtaaagttactcctaaaggattaactgagcaaaca
ccagaagaaaaattattatatgcaattttcggagctaaatctaaagaggtacgtgatact
tcattacgtgtaccacatggtgctgatggagtagttgcggatgttaaaatctttaaacgt
gaagatggagcagaacttgctaatggtgttaatgaacttgttcgagtatttattatccaa
aaacgtaaaatacgtgttggggataaaatggcaggacgtcatggtaacaaaggggttatc
tctaatatcttacctgaagaagatatgccatatttaccagacggtacacctgtagatgtt
atgttaaacccacttggggttccatctcgtatgaatataggacaagtattagagcttcat
ttaggtatggcggctaaacaattaggaattcatgttgcgacaccagtatttgatggtgca
agtgatgatgatgtttggtcaacagtagctgaggcgggaatggcaaaagatgctaaaaca
gttctttatgatggacgtactggtgagccatttgatagccgtgtttcagttggggtaatg
tacatgattaaattatctcacatggttgatgataaacttcatgcacgttcaattggtcca
tattcattagttactcaacaaccacttggaggtaaagcacaatttggtggtcaaagattt
ggtgagatggaggtatgggcacttgaagcatatggtgcagcgtatacacttcaagaaatc
ttaacatacaaatcagatgatacaaatggtcgtgttaaaacatatgaagcaattgttaaa
ggtgaaaatattcctcgacctggagtacctgaatcattccgagttcttatgaaagaacta
caagctttaggtatggactttagagttatggataaagatgataacgaagtagatatgggt
gatattgatttaggtgatactattgaattccatggtcatcatgaatcagaaggacataaa
gaagaagtagaagaaacacaagacgttacttcagaatcaggagattattcatcacttgca
aatatgattacatcaactgattcagaagaagtagtagaagaaagtgatgatagtaactca
ggttatgcatcacttgctagcttattattatctgatactgatgattatgcagatgtagaa
gatatagatgacgaagttgatgaagaataa
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