Geoalkalibacter subterraneus: GSUB_16415
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Entry
GSUB_16415 CDS
T03585
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsb03016
]
GSUB_16415
03036 Chromosome and associated proteins [BR:
gsb03036
]
GSUB_16415
Transfer RNA biogenesis [BR:
gsb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GSUB_16415
Prokaryotic type
GSUB_16415
Chromosome and associated proteins [BR:
gsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GSUB_16415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
DAO
FAD_binding_2
AlaDh_PNT_C
ThiF
Pyr_redox
HI0933_like
FAD_binding_3
DUF6083
Motif
Other DBs
NCBI-ProteinID:
AJF07819
UniProt:
A0A0B5FT32
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All DBs
Position
complement(3468831..3470693)
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AA seq
620 aa
AA seq
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MLSDYGKKYDVIVVGAGHAGCEAALAAARMGCVTLLLTMNLDTVALMSCNPAIGGLAKGH
LVKEIDALGGEMAGVIDQVGIQFRILNTKKGPAVRATRAQADRSKYNQEMKARLERQPGL
FLKQGTVNRLLLSGASVAGVETREGIAYQGRKVILTNGTFLGGLVHIGLHHYGSGRAGEP
SSEFLSGQIKDLGFEVGRLKTGTPARLAGDSIDYAKLEQQHGDPQPRPFSFLTEKIRSPQ
VPCHITYTNPRTHDVIRAGLDRSPLYTGKIQGVGPRYCPSIEDKVHRFPEKDQHQIFLEP
EGLATREVYPNGVSTSLPADVQLAFLRTIPGLEQVEVMRPGYAIEYDYFPPTQLRATLET
KHVEGLFHAGQINGTSGYEEAAAQGLLAGINAALQVREDDPLVLTRDTSYIGVMVDDLVT
LGTNEPYRMFTSRSEYRLLLREDNADQRLTPLGRRIGLVSDERWRHFSEKQEQVERGRER
LRQVKVSPGQTEILQRLPVSELRQGQTLEELLRRPEVTLDDLMFLDEELTSISLSAREQL
EIQTKYAGYIERQKEMVERFRRTEQVVIPADFNYEKLSGLSFEVREKLMKTQPATLGQAS
RIPGVTPAAIAVLSVAVRKK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgattacggcaaaaagtatgacgtcattgtcgttggtgcgggccatgcaggg
tgcgaggcggctctggcggcggcacggatgggctgcgtcaccctgttgctgaccatgaac
ctcgacactgtggcgttgatgtcatgtaacccggctatcggggggttggcaaaaggccac
ctggtcaaagagattgatgcccttggtggcgaaatggctggtgtgattgaccaggtgggg
attcagtttcgaattctgaacaccaaaaaaggtccggctgttcgtgccacccgggctcag
gccgaccggtccaagtataaccaggaaatgaaagcgaggctcgagcggcagcctggtttg
ttcttaaagcagggcacggttaatcgcctgctgttaagcggggcatccgtcgcgggagtt
gagacccgtgaggggatagcttatcagggaagaaaagttattttgaccaatgggaccttt
ctgggagggctggtccatattggcctccatcactacggatcgggacgagccggagaacct
tcgtctgagtttttgtccggacagattaaggacctcggttttgaagtcgggaggttgaag
actgggacgcctgcaaggctggccggggattcaatcgattatgccaagttggagcagcaa
catggtgatccgcagcccagacctttttcttttttgactgaaaaaatccggtcgccgcag
gtcccctgtcatatcacctataccaatccacgcactcacgatgttattcgggctggcttg
gatcgctcccctctttataccggaaagatccaaggggtcggtccacgctactgcccttcc
atagaggataaggtacatcgttttccggaaaaggatcagcatcagattttcctggagccg
gaaggtctggcaacccgcgaggtctaccctaacggggtttctacctctttgccggcagat
gtacagttggcttttttgcgcacaattcccggtcttgaacaggttgaggtcatgcggcca
gggtatgcaattgaatatgattattttccgccgacacagcttcgcgcgacattggagaca
aagcatgtcgaaggactcttccatgccggccagatcaatggaacctcgggttatgaagaa
gctgcggctcagggtcttctcgccggcatcaacgctgctttgcaggtgagggaagatgac
ccgctggtgttaacccgcgacacctcgtacatcggggtgatggtggatgatctggtcacc
ctcggaaccaacgagccttatcgcatgtttacctcgcgatctgagtatcgactgttgttg
agagaggataatgcagaccaacggttaacaccgctggggcgtagaataggcttggtaagc
gatgaacgctggcgccatttcagcgaaaagcaggagcaggtggagcgcggccgggagcgg
ttgcgccaggtcaaggtgtctcctggccagacagaaattttacagcgtttgcctgtgagt
gaattgcgccagggacaaactctcgaggagttgctgcggcggccggaggtaacccttgat
gatctgatgttcctcgatgaggaactcacatccatttctctgtccgccagggaacagctg
gaaatccaaaccaagtatgcgggatatattgaacgtcaaaaggaaatggtcgaaaggttt
cgcaggaccgagcaggtggtgatcccggcagatttcaactacgaaaaactctccgggctg
tcttttgaggtgcgcgaaaaattgatgaagactcagcccgcaacactcggccaggcttcc
cgcatcccaggcgttactcctgccgcaattgcggtattatccgttgcggtacgcaaaaaa
taa
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