Geochorda subterranea: VLY81_09610
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Entry
VLY81_09610 CDS
T10455
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gsc Geochorda subterranea
Brite
KEGG Orthology (KO) [BR:
gsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsc03400
]
VLY81_09610
DNA repair and recombination proteins [BR:
gsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VLY81_09610
Archaeal homologous recombinant proteins
VLY81_09610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
WRP13695
UniProt:
A0ABZ1BMA4
LinkDB
All DBs
Position
complement(2011048..2012202)
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AA seq
384 aa
AA seq
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MLRLLHLADLHLGWAPAYMEEPRRSERRRRRDSLLERAVRFALDPANRIGMVVIAGDLFE
SHRPDRAQVASVLEQLRRLEAAGVRVVTVPGNHDEITYPDSVYRERAAEWPGLLVQSPVP
VHAGTVTVGGVPVHVYGLAYTGGLTPTQEPLAQFPRVDEPGFHLAVLHGTLGTWGGERSL
PLDGAALGRAGYDYVALGHIHRHERHDLDGTPAVYCGAVEGKGWDDPGVGQWTVVEVDMP
ARAGGRARVEVRTCPAEGVQPIETISLDAGAYGGAAELRSAIEALADPERILQVRLTGAP
AYEVSARELQSALAGLFFHLSVVDDEVLFAPALLERWASEPTIRGLFVKRMQARIAEAED
EETRRLLQRALRQGLYALAGGEPR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggctgctgcacctcgccgaccttcacctggggtgggcgcccgcctacatggag
gagccccggcgctccgagcgccgccggcggcgggatagcctgctggagcgagcggtgcgc
ttcgccctcgatcccgccaaccgcatcgggatggtcgtcatcgccggggacctcttcgaa
tcgcaccgccccgaccgggcccaggtggcttccgtattggagcaactgcgccgcctggag
gcggcgggcgtccgggtcgtcaccgtgcccggcaaccacgacgagatcacctaccctgac
tccgtctaccgcgaacgggcggccgagtggccggggctgctggtgcagagcccggtgccc
gtgcatgccgggaccgtgacggttggaggcgtgcccgtccacgtctacggcctggcctac
accggcggcctgacgcccacccaagagccgctggcgcagtttccgcgggtggacgagccg
gggtttcacctggcggtcctgcacggcacgctggggacgtggggcggcgagcggagcctg
ccgctggacggggcggcgctggggcgggcgggctacgactacgtcgcgttgggccacatc
caccgccacgagcggcacgacctcgacggcaccccagccgtctactgcggggcggtggag
ggcaaggggtgggacgacccgggcgtcgggcagtggaccgtggtcgaggtggacatgccc
gcgcgggccggggggcgggcacgggtcgaggtgcgcacttgcccggccgagggagtccag
cccatcgagacgatcagcctcgatgccggggcctacggtggggcagcggagctgcgatcg
gccatcgaagcgctggccgaccccgagcgcatcctgcaggtgcggctgacgggtgccccg
gcgtacgaggtgtcggcccgggagctgcagtcggcgctcgcggggctcttcttccacctg
agcgtggtggacgacgaggtgctattcgccccggcgttgctcgaacgctgggcgtccgaa
ccgaccatccggggcctcttcgtcaagcgcatgcaggccaggatcgccgaggcagaggat
gaggagactcgccgcctgctgcagcgggcgctgcggcagggcctctacgccctggcgggg
ggtgagccgcggtga
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