Gulosibacter sediminis: M3M28_02475
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Entry
M3M28_02475 CDS
T08132
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gsd
Gulosibacter sediminis
Pathway
gsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M3M28_02475 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsd03400
]
M3M28_02475 (mutM)
Enzymes [BR:
gsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M3M28_02475 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M3M28_02475 (mutM)
DNA repair and recombination proteins [BR:
gsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M3M28_02475 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Auto_anti-p27
OrfB_Zn_ribbon
Zn_Tnp_IS91
DZR
Motif
Other DBs
NCBI-ProteinID:
UQN15353
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All DBs
Position
563580..564446
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AA seq
288 aa
AA seq
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MPELPEVEVVRRGLQPAVFGATVRSVEVRDERALKRHTGDALDFVDRIEGAVLGEPQRRG
KFLWIPFGAGFALMAHLGMSGQLLVRPIGSVDERQLRVRMRIERGGGALELRFSDQRLFG
SLAVDRLLPADDGELLPSQVGHIARDPLDPAFDVDAVVARMRASGRNIKTLILDQQLVSG
VGNIYADEALWRARLYWGRPGRSISPAKLRELLGHVVQVFQDALAEGGTSFDALYVNVNG
ESGYFAHSLNAYGRTDQACARCGSPIRRVKFMNRSSFFCPQCQRKRSS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagcttcccgaagttgaggtcgtgcgtcgtgggctgcagcccgcggtgttcggc
gccacggtgcgctcggtggaggtgcgcgacgagcgcgcgctgaagcggcacaccggcgat
gcgctcgactttgtcgaccgcattgagggcgccgtgctcggcgagccgcagcggcgcggc
aagtttctctggattccgttcggcgccggcttcgcgctcatggcgcatctgggtatgagc
ggccagctgctcgtgcggccgattggctcggtcgatgagcgtcagttgcgcgtgcggatg
cgcatcgagcgcggcgggggagcgctggagctgcgcttcagcgaccagcggttgttcggc
tcgctcgcggtcgaccgactgctgcccgccgacgacggtgagttgctgccctcgcaggtt
ggccacatcgcccgcgacccgcttgacccggcgttcgacgtggatgcggtcgtggcgcgc
atgcgcgcatccggccgcaacatcaagacgctcattctcgatcagcagctcgtgtcaggt
gttggcaacatctacgccgacgaggcgctctggcgcgcgcggctctactggggccggcct
ggtcgttcgatctcgccagcgaagctgcgcgagttgctcggccacgtcgtgcaggtgttt
caggatgcgctggccgagggtggcacctcgttcgacgcgctgtacgtgaacgtcaacggt
gaatcgggctattttgcgcactctttaaatgcctatggtcgtaccgaccaggcatgtgca
cgatgtgggtcacccatccgccgggtgaaatttatgaaccgatcctcgtttttctgtcct
cagtgtcagcgcaagcgctcttcgtag
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